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AthenaOutputStream.cxx
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1/*
2 Copyright (C) 2002-2025 CERN for the benefit of the ATLAS collaboration
3*/
4
6
7// STL include files
8#include <cassert>
9#include <format>
10#include <sstream>
11
12// Framework include files
18#include "GaudiKernel/AlgTool.h"
19#include "GaudiKernel/ClassID.h"
20#include "GaudiKernel/GaudiException.h"
21#include "GaudiKernel/IAlgManager.h"
22#include "GaudiKernel/IIoComponentMgr.h"
23#include "GaudiKernel/IOpaqueAddress.h"
24#include "GaudiKernel/IProperty.h"
25#include "GaudiKernel/ISvcLocator.h"
26#include "GaudiKernel/MsgStream.h"
29#include "SGTools/DataProxy.h"
30#include "SGTools/ProxyMap.h"
31#include "SGTools/SGIFolder.h"
38
39// Local include files
40#include "AltDataBucket.h"
41
42// Standard Constructor
43AthenaOutputStream::AthenaOutputStream(const std::string& name, ISvcLocator* pSvcLocator)
44 : base_class(name, pSvcLocator),
46 m_p2BWritten(std::format("SG::Folder/{}_TopFolder", name), this),
47 m_compressionDecoderHigh(std::format("SG::Folder/{}_compressed_high", name), this),
48 m_compressionDecoderLow(std::format("SG::Folder/{}_compressed_low", name), this),
49 m_transient(std::format("SG::Folder/{}_transient", name), this),
50 m_streamer(std::format("AthenaOutputStreamTool/{}Tool", name), this)
51{
52 // Ensure the service locater is good
53 assert(pSvcLocator);
54
55 // This property depends on the name that's known at construction time
56 // Therefore, do it the old fashioned way
57 declareProperty("WritingTool", m_streamer);
58
59 // Associate action handlers with the AcceptAlgs,
60 // RequireAlgs & VetoAlgs properties
61 m_itemList.declareUpdateHandler(&AthenaOutputStream::itemListHandler, this);
64}
65
66// Standard Destructor
68 // Clear the internal caches
69 m_streamerMap.clear();
70}
71
72// Initialize data writer
74 ATH_MSG_DEBUG("In initialize");
75
76 // Initialize the FilteredAlgorithm base
78
79 // Reset the number of events written
80 m_events = 0;
81
82 // Set up the SG services
83 ATH_CHECK( m_dataStore.retrieve() );
84 ATH_MSG_DEBUG(std::format("Found {} store.", m_dataStore.typeAndName()));
85 if (!m_metadataItemList.value().empty()) {
86 ATH_CHECK( m_metadataStore.retrieve() );
87 ATH_MSG_DEBUG(std::format("Found {} store.", m_metadataStore.typeAndName()));
88 }
89
90 // Set up various services
91 ATH_CHECK( m_pCLIDSvc.retrieve() );
92 ATH_CHECK( m_dictLoader.retrieve() );
93 ATH_CHECK( m_tpCnvSvc.retrieve() );
94 ATH_CHECK( m_outSeqSvc.retrieve() );
95
96 // Get Output Stream tool for writing
97 ATH_CHECK( m_streamer.retrieve() );
98 ATH_CHECK( m_streamer->connectServices(m_dataStore.typeAndName(), m_persName, m_extendProvenanceRecord) );
99
100 ATH_CHECK( m_helperTools.retrieve() );
101 ATH_MSG_INFO("Found " << m_helperTools);
102 ATH_MSG_INFO(std::format("Data output: {}", m_outputName.toString()));
103
104 for (auto& tool : m_helperTools) {
105 ATH_CHECK( tool->postInitialize() );
106 }
107
108 // Register this algorithm for 'I/O' events
109 ServiceHandle<IIoComponentMgr> iomgr("IoComponentMgr", name());
110 ATH_CHECK( iomgr.retrieve() );
111 ATH_CHECK( iomgr->io_register(this) );
112 ATH_CHECK( iomgr->io_register(this, IIoComponentMgr::IoMode::WRITE, m_outputName) );
113 ATH_CHECK( this->io_reinit() );
114
115 // Add an explicit input dependency for everything in our item list
116 // that we know from the configuration is in the transient store.
117 // We don't want to add everything on the list, because configurations
118 // often initialize this with a maximal static list of everything
119 // that could possibly be written.
120 {
121 ATH_CHECK( m_transient.retrieve() );
122 IProperty *pAsIProp = dynamic_cast<IProperty*> (&*m_transient);
123 if (!pAsIProp) {
124 ATH_MSG_FATAL ("Bad folder interface");
125 return StatusCode::FAILURE;
126 }
127 ATH_CHECK (pAsIProp->setProperty("ItemList", m_transientItems.toString()));
128
129 for (const SG::FolderItem& item : *m_p2BWritten) {
130 // Load ROOT dictionaries now.
131 loadDict (item.id());
132
133 const std::string& k = item.key();
134 if (k.find('*') != std::string::npos) continue;
135 if (k.find('.') != std::string::npos) continue;
136 for (const SG::FolderItem& titem : *m_transient) {
137 if (titem.id() == item.id() && titem.key() == k) {
138 DataObjID id (item.id(), std::format("{}+{}", m_dataStore.name(), k));
139 this->addDependency (id, Gaudi::DataHandle::Reader);
140 break;
141 }
142 }
143 }
144 m_transient->clear();
145 }
146
147 // Also load dictionaries for metadata classes.
148 if (!m_metadataItemList.value().empty()) {
149 IProperty *pAsIProp = dynamic_cast<IProperty*> (&*m_transient);
150 if (!pAsIProp) {
151 ATH_MSG_FATAL ("Bad folder interface");
152 return StatusCode::FAILURE;
153 }
154 ATH_CHECK (pAsIProp->setProperty("ItemList", m_metadataItemList.toString()));
155 for (const SG::FolderItem& item : *m_transient) {
156 loadDict (item.id());
157 }
158 m_transient->clear();
159 }
160
161 // Also make sure we have the dictionary for Token.
162 m_dictLoader->load_type ("Token");
163
164 // Listen to event range incidents if incident name is configured
165 ATH_CHECK( m_incidentSvc.retrieve() );
166 if( !m_outSeqSvc->incidentName().empty() ) {
167 // use priority 95 to make sure the Output Sequencer goes first (it has priority 100)
168 m_incidentSvc->addListener(this, IncidentType::BeginProcessing, 95);
169 m_incidentSvc->addListener(this, IncidentType::EndProcessing, 95);
170 }
171
172 // Check compression settings and print some information about the configuration
173 // Both should be between [5, 23] and high compression should be < low compression
175 ATH_MSG_INFO(std::format("Float compression mantissa bits for high compression "
176 "({}) is outside the allowed range of [5, 23].",
177 m_compressionBitsHigh.toString()));
178 ATH_MSG_INFO("Setting it to the appropriate limit.");
180 }
182 ATH_MSG_INFO(std::format("Float compression mantissa bits for low compression "
183 "({}) is outside the allowed range of [5, 23].",
184 m_compressionBitsLow.toString()));
185 ATH_MSG_INFO("Setting it to the appropriate limit.");
187 }
189 ATH_MSG_ERROR(std::format("Float compression mantissa bits for low compression "
190 "({}) is lower than or equal to high compression "
191 "({})! Please check the configuration! ",
192 m_compressionBitsLow.toString(),
193 m_compressionBitsHigh.toString()));
194 return StatusCode::FAILURE;
195 }
196 if(m_compressionListHigh.value().empty() && m_compressionListLow.value().empty()) {
197 ATH_MSG_VERBOSE("Both high and low float compression lists are empty. Float compression will NOT be applied.");
198 } else {
199 ATH_MSG_INFO("Either high or low (or both) float compression lists are defined. Float compression will be applied.");
200 ATH_MSG_INFO(std::format("High compression will use {} mantissa bits, and "
201 "low compression will use {} mantissa bits.",
202 m_compressionBitsHigh.toString(),
203 m_compressionBitsLow.toString()));
204 }
205
206 // Setup stream name
207 if (m_streamName.empty()) {
208 m_streamName.setValue(this->name());
209 }
210
211 // Set SG key for selected variable information.
212 m_selVetoesKey = std::format("SelectionVetoes_{}", m_streamName.toString());
213 ATH_CHECK( m_selVetoesKey.initialize() );
214
215 m_compInfoKey = std::format("CompressionInfo_{}", m_streamName.toString());
216 ATH_CHECK( m_compInfoKey.initialize() );
217
218 ATH_MSG_DEBUG("End initialize");
219 return StatusCode::SUCCESS;
220}
221
222// Handle incidents
223void AthenaOutputStream::handle(const Incident& inc)
224{
225 ATH_MSG_DEBUG(std::format("handle() incident type: {}", inc.type()));
226 // mutex shared with write() which is called from writeMetaData
227 std::unique_lock<mutex_t> lock(m_mutex);
228
229 if( inc.type() == "MetaDataStop" ) {
230 if( m_outSeqSvc->inUse() ) {
231 if( m_outSeqSvc->inConcurrentEventsMode() ) {
232 // EventService MT - write metadata and close all remaining substreams
233 while( m_streamerMap.size() > 0 ) {
234 finalizeRange( m_streamerMap.begin()->first );
235 }
236 return;
237 }
238 if( m_outSeqSvc->lastIncident() == "EndEvent" ) {
239 // in r22 EndEvent comes before output writing
240 // - queue metadata writing and disconnect for after Event write
242 return;
243 }
244 }
245 // not in Event Service
247 }
248 else if( m_outSeqSvc->inUse() ) {
249 // Handle Event Ranges for Event Service
250 EventContext::ContextID_t slot = inc.context().slot();
251 if( slot == EventContext::INVALID_CONTEXT_ID ) {
252 throw GaudiException("Received Incident with invalid slot in ES mode", name(), StatusCode::FAILURE);
253 }
254 auto count_events_in_range = [&](const std::string& range) {
255 return std::count_if(m_slotRangeMap.cbegin(), m_slotRangeMap.cend(),
256 [&](auto& el){return el.second == range;} );
257 };
258 if( inc.type() == IncidentType::BeginProcessing ) {
259 // get the current/old range filename for this slot
260 const std::string rangeFN = m_slotRangeMap[ slot ];
261 // build the new range filename for this slot
262 const std::string newRangeFN = m_outSeqSvc->buildSequenceFileName( m_outputName );
263 if( !rangeFN.empty() and rangeFN != newRangeFN ) {
264 ATH_MSG_INFO(std::format("Slot range change: '{}' -> '{}'", rangeFN, newRangeFN));
265 ATH_MSG_DEBUG(std::format("There are {} slots in use",m_slotRangeMap.size()));
266 for(const auto & range : m_slotRangeMap ) {
267 ATH_MSG_DEBUG(std::format("Slot: {} FN={}", range.first, range.second));
268 }
269 if( count_events_in_range(rangeFN) == 1 ) {
270 finalizeRange( rangeFN );
271 }
272 }
273 ATH_MSG_INFO(std::format("slot {} processing event in range: {}", slot, newRangeFN));
274 m_slotRangeMap[ slot ] = newRangeFN;
275 // remember the RangeID for this slot so we can write metadata *after* a range change
276 m_rangeIDforRangeFN[ newRangeFN ] = m_outSeqSvc->currentRangeID();
277 }
278 else if( inc.type() == IncidentType::EndProcessing ) {
279 ATH_MSG_DEBUG(std::format("There are {} slots in use", m_slotRangeMap.size()));
280 for( const auto& range : m_slotRangeMap ) {
281 ATH_MSG_DEBUG(std::format("Slot: {} FN={}", range.first, range.second));
282 }
283 if( m_slotRangeMap.size() > 1 ) {
284 // if there are multiple slots, we can detect if the range ended with this event
285 // - except the last range, because there is no next range to clear the slot map
286 const std::string rangeFN = m_slotRangeMap[ slot ];
287 if( count_events_in_range(rangeFN) == 1 ) {
288 finalizeRange( rangeFN );
289 m_slotRangeMap[ slot ].clear();
290 }
291 }
292 }
293 }
294 ATH_MSG_DEBUG(std::format("Leaving incident handler for {}", inc.type()));
295}
296
297// Note - this method works in any slot - MetaCont uses the filenames to find objects
298void AthenaOutputStream::finalizeRange( const std::string & rangeFN )
299{
300 ATH_MSG_DEBUG(std::format("Writing MetaData to {}", rangeFN));
301 // MN: not calling StopMetaData Incident here but directly writeMetaData() - OK for Sim, check others
302 // metadata tools like CutFlowSvc are not able to handle this yet
303 const std::string rememberID = m_outSeqSvc->setRangeID( m_rangeIDforRangeFN[ rangeFN ] );
304 writeMetaData( rangeFN );
305 m_outSeqSvc->setRangeID( rememberID );
306
307 ATH_MSG_INFO(std::format("Finished writing Event Sequence to {}", rangeFN));
308 auto strm_iter = m_streamerMap.find( rangeFN );
309 strm_iter->second->finalizeOutput().ignore();
310 strm_iter->second->finalize().ignore();
311 m_streamerMap.erase( strm_iter );
312 m_outSeqSvc->publishRangeReport( rangeFN );
313}
314
315// Method to write MetaData for this stream
316// in ES mode the range substream is determined by the current Event slot
317// called from the incident handler - returns void and throws GaudiExceptions on errors
318void AthenaOutputStream::writeMetaData(const std::string& outputFN)
319{
320 // use main stream tool by default, or per outputFile in ES mode
321 IAthenaOutputStreamTool* streamer = outputFN.empty()? &*m_streamer : m_streamerMap[outputFN].get();
322
323 for (auto& tool : m_helperTools) {
324 if (!tool->preFinalize().isSuccess()) {
325 throw GaudiException("Cannot finalize helper tool", name(), StatusCode::FAILURE);
326 }
327 }
328 if( m_metaDataSvc->prepareOutput(outputFN).isFailure() ) {
329 throw GaudiException("Failed on MetaDataSvc prepareOutput", name(), StatusCode::FAILURE);
330 }
331 // lock all metadata to prevent updates during writing
333
334 // Prepare the WriteDataHeaderForms incident
335 std::string DHFWriteIncidentfileName = m_outSeqSvc->buildSequenceFileName(m_outputName);
336 // remove technology from the name
337 size_t pos = DHFWriteIncidentfileName.find(':');
338 if( pos != std::string::npos ) DHFWriteIncidentfileName = DHFWriteIncidentfileName.substr(pos+1);
339 FileIncident incident(name(), "WriteDataHeaderForms", DHFWriteIncidentfileName);
340 m_incidentSvc->fireIncident(incident);
341
342 ATH_MSG_DEBUG("metadataItemList: " << m_metadataItemList.value() );
343 if (!m_metadataItemList.value().empty()) {
345 StatusCode status = streamer->connectServices(m_metadataStore.typeAndName(), m_persName, false);
346 if (status.isFailure()) {
347 throw GaudiException("Unable to connect metadata services", name(), StatusCode::FAILURE);
348 }
349 m_outputAttributes = "[OutputCollection=MetaDataHdr][PoolContainerPrefix=MetaData][AttributeListKey=]";
350 m_p2BWritten->clear();
351 IProperty *pAsIProp(nullptr);
352 if ((m_p2BWritten.retrieve()).isFailure() ||
353 nullptr == (pAsIProp = dynamic_cast<IProperty*>(&*m_p2BWritten)) ||
354 (pAsIProp->setProperty("ItemList", m_metadataItemList.toString())).isFailure()) {
355 throw GaudiException("Folder property [metadataItemList] not found", name(), StatusCode::FAILURE);
356 }
357 if (write().isFailure()) {
358 throw GaudiException("Cannot write metadata", name(), StatusCode::FAILURE);
359 }
360 FileIncident incident(name(), "WriteDataHeaderForms", DHFWriteIncidentfileName + m_outputAttributes);
361 m_incidentSvc->fireIncident(incident);
362
363 m_outputAttributes.clear();
365 status = streamer->connectServices(m_dataStore.typeAndName(), m_persName, m_extendProvenanceRecord);
366 if (status.isFailure()) {
367 throw GaudiException("Unable to re-connect services", name(), StatusCode::FAILURE);
368 }
369 m_p2BWritten->clear();
370 if ((pAsIProp->setProperty(m_itemList)).isFailure()) {
371 throw GaudiException("Folder property [itemList] not found", name(), StatusCode::FAILURE);
372 }
373 ATH_MSG_DEBUG(std::format("Metadata items written: {}", m_metadataItemList.value().size()));
374 }
375}
376
377// Terminate data writer
379{
380 bool failed = false;
381 ATH_MSG_DEBUG("finalize: Optimize output");
382 // Connect the output file to the service
383 if (!m_streamer->finalizeOutput().isSuccess()) {
384 failed = true;
385 }
386 ATH_MSG_DEBUG("finalize: end optimize output");
387 // Release the tools
388 if (!m_helperTools.release().isSuccess()) {
389 failed = true;
390 }
391 if (!m_streamer.release().isSuccess()) {
392 failed = true;
393 }
394 if (failed) {
395 return(StatusCode::FAILURE);
396 }
397 // Clear the internal caches
398 m_objects.clear();
399 m_objects.shrink_to_fit();
400 m_ownedObjects.clear();
401 m_altObjects.clear();
402 return(StatusCode::SUCCESS);
403}
404
405// Execute data writer
407 bool failed = false;
408 // Call tool preExecute prior to writing
409 for (auto& tool : m_helperTools) {
410 if (!tool->preExecute().isSuccess()) {
411 failed = true;
412 }
413 }
414 // Write the event if the event is accepted
415 if (isEventAccepted()) {
416 if (write().isFailure()) {
417 failed = true;
418 }
419 }
420 // Call tool postExecute after writing
421 for (auto& tool : m_helperTools) {
422 if(!tool->postExecute().isSuccess()) {
423 failed = true;
424 }
425 }
426 // See if we should write metadata and do if so
430 // finalize will disconnect output
431 if( !finalize().isSuccess() ) {
432 failed = true;
433 }
434 }
435 if (failed) {
436 return(StatusCode::FAILURE);
437 }
438 return(StatusCode::SUCCESS);
439}
440
441// The main method that performs the writing
443 bool failed = false;
445 std::string outputFN;
446
447 std::unique_lock<mutex_t> lock(m_mutex);
448 outputFN = m_outSeqSvc->buildSequenceFileName( m_outputName );
449
450 // Handle Event Ranges
451 if( m_outSeqSvc->inUse() and m_outSeqSvc->inConcurrentEventsMode() ) {
452 ATH_MSG_DEBUG(std::format("Writing event sequence to {}", outputFN));
453 streamer = m_streamerMap[ outputFN ].get();
454 if( !streamer ) {
455 // new range, needs a new streamer tool
456 IAlgTool* st = AlgTool::Factory::create( m_streamer->type(), m_streamer->type(), m_streamer->name(), this ).release();
457 st->addRef();
458 streamer = dynamic_cast<IAthenaOutputStreamTool*>( st );
459 IProperty *mstreamer_props = dynamic_cast<IProperty*> (&*m_streamer);
460 IProperty *streamer_props = dynamic_cast<IProperty*> (&*streamer);
461 if (!mstreamer_props || !streamer_props) {
462 ATH_MSG_FATAL("Cannot cast streamer to IProperty");
463 return StatusCode::FAILURE;
464 }
465 for ( const auto& prop : mstreamer_props->getProperties() ) {
466 ATH_CHECK( streamer_props->setProperty( *prop ) );
467 }
468 if( !streamer or streamer->initialize().isFailure()
469 or streamer->connectServices(m_dataStore.typeAndName(), m_persName, m_extendProvenanceRecord).isFailure() ) {
470 ATH_MSG_FATAL(std::format("Unable to initialize OutputStreamTool for {}", outputFN));
471 return StatusCode::FAILURE;
472 }
473 m_streamerMap[ outputFN ].reset( streamer );
474 }
475 }
476
477 // Clear any previously existing item list
478 // and collect all objects that are asked to be written out
481
482 // keep a local copy of the object lists so they are not overwritten when we release the lock
483 IDataSelector objects = std::move( m_objects );
484 IDataSelector altObjects = std::move( m_altObjects );
485 std::vector<std::unique_ptr<DataObject> > ownedObjects = std::move( m_ownedObjects );
486
487 // prepare before releasing lock because m_outputAttributes change in metadataStop
488 const std::string connectStr = outputFN + m_outputAttributes;
489
490 for (auto& tool : m_helperTools) {
491 ATH_CHECK( tool->preStream() );
492 }
493
494 // MN: would be nice to release the Stream lock here
495 // lock.unlock();
496
497 // Connect the output file to the service
498 if (!streamer->connectOutput(connectStr).isSuccess()) {
499 ATH_MSG_FATAL("Could not connectOutput");
500 return StatusCode::FAILURE;
501 }
502 ATH_MSG_DEBUG(std::format("connectOutput done for {}", outputFN));
503 StatusCode currentStatus = streamer->streamObjects(objects, connectStr);
504 // Do final check of streaming
505 if (!currentStatus.isSuccess()) {
506 if (!currentStatus.isRecoverable()) {
507 ATH_MSG_FATAL("streamObjects failed.");
508 failed = true;
509 } else {
510 ATH_MSG_DEBUG("streamObjects failed.");
511 }
512 }
513 bool doCommit = false;
514 if (!streamer->commitOutput(doCommit).isSuccess()) {
515 ATH_MSG_FATAL("commitOutput failed.");
516 failed = true;
517 }
518 if (failed) {
519 return(StatusCode::FAILURE);
520 }
521 m_events++;
522 return(StatusCode::SUCCESS);
523}
524
525// Clear collected object list
527 m_objects.clear();
528 m_ownedObjects.clear();
529 m_altObjects.clear();
530}
531
532// Collect objects
534 if (m_itemListFromTool) {
535 if (!m_streamer->getInputItemList(&*m_p2BWritten).isSuccess()) {
536 ATH_MSG_WARNING("collectAllObjects() could not get ItemList from Tool.");
537 }
538 }
539
540 // This holds the vetoes for the AuxID selection
541 auto vetoes = std::make_unique<SG::SelectionVetoes>();
542 // This holds the lossy float compression information
543 auto compInfo = std::make_unique<SG::CompressionInfo>();
544
545 m_p2BWritten->updateItemList(true);
546 // Collect all objects that need to be persistified:
547 for (const auto& i : *m_p2BWritten) {
548 ATH_CHECK( addItemObjects(i, *vetoes, *compInfo) );
549 }
550
551 // If there were any variable selections, record the information in SG.
552 if (!vetoes->empty()) {
553 ATH_CHECK( SG::makeHandle (m_selVetoesKey).record (std::move (vetoes)) );
554 }
555
556 // Store the lossy float compression information in the SG.
557 if (!compInfo->empty()) {
558 ATH_CHECK( SG::makeHandle (m_compInfoKey).record (std::move (compInfo)) );
559 }
560
561 return StatusCode::SUCCESS;
562}
563
564// Build a list of objects we're going to write out
565// This function also builds the list of vetoed AuxIDs
566// and the lossy float compression lists.
568 SG::SelectionVetoes& vetoes,
569 SG::CompressionInfo& compInfo)
570{
571 // anything after a dot is a list of dynamic Aux attributes, separated by dots
572 size_t dotpos = item.key().find('.');
573 std::string item_key, aux_attr;
574 if( dotpos != std::string::npos ) {
575 item_key = item.key().substr(0, dotpos+1);
576 aux_attr = item.key().substr(dotpos+1);
577 } else {
578 item_key = item.key();
579 }
580 CLID item_id = item.id();
581 ATH_MSG_DEBUG(std::format("addItemObjects({},\"{}\") called", item_id, item_key));
582 ATH_MSG_DEBUG(std::format(" Key:{}", item_key));
583 if( aux_attr.size() ) {
584 ATH_MSG_DEBUG(std::format(" Aux Attr:{}", aux_attr));
585 }
586
587 // Here we build the list of attributes for the lossy float compression
588 // Note that we do not allow m_compressionBitsHigh >= m_compressionBitsLow
589 // Otherwise is, in any case, a logical error and they'd potentially overwrite each other
590 std::map< unsigned int, std::set< std::string > > comp_attr_map;
591 comp_attr_map[ m_compressionBitsHigh ] = buildCompressionSet( m_compressionDecoderHigh, item_id, item_key );
592 comp_attr_map[ m_compressionBitsLow ] = buildCompressionSet( m_compressionDecoderLow, item_id, item_key );
593
594 // Print some debugging information regarding the lossy float compression configuration
595 for( const auto& it : comp_attr_map ) {
596 ATH_MSG_DEBUG(std::format(" Comp Attr {} with {} mantissa bits.", it.second.size(), it.first));
597 if ( it.second.size() > 0 ) {
598 for( const auto& attr : it.second ) {
599 ATH_MSG_DEBUG(std::format(" >> {}", attr));
600 }
601 }
602 }
603
604 // For MetaData objects of type T that are kept in MetaContainers get the MetaCont<T> ID
605 const CLID remapped_item_id = m_metaDataSvc->remapMetaContCLID( item_id );
606 SG::ConstProxyIterator iter, end;
608 bool gotProxies = false;
609 // Look for the clid in storegate
610 SG::DataProxy* match = (*m_currentStore)->proxy(remapped_item_id, item_key, true);
611 if (match != nullptr) {
612 map.insert({item_key, match});
613 iter = map.begin();
614 end = map.end();
615 gotProxies = true;
616 }
617 // Look for the clid in storegate
618 if (!gotProxies && ((*m_currentStore)->proxyRange(remapped_item_id, iter, end)).isSuccess()) {
619 gotProxies = true;
620 }
621 if (gotProxies) {
622 bool added = false, removed = false;
623 // Now loop over any found proxies
624 for (; iter != end; ++iter) {
625 SG::DataProxy* itemProxy(iter->second);
626 std::string proxyName = itemProxy->name();
627 std::string stream;
629 // only check metadata keys
630 stream = m_metaDataSvc->removeStreamFromKey(proxyName); // can modify proxyName
631 }
632 // Does this key match the proxy key name - allow for wildcarding and aliases
633 bool keyMatch = ( item_key == "*" ||
634 item_key == proxyName ||
635 itemProxy->hasAlias(item_key) );
636 if (!keyMatch) {
637 // For item list we currently allow wildcards ('*'), which has limited use, e.g.:
638 // xAOD::CutBookkeeperAuxContainer#IncompleteCutBookkeepers*Aux.
639 // Here we look for those few cases...
640 keyMatch = simpleMatch(item_key, proxyName);
641 ATH_MSG_DEBUG(std::format("Result of checking {} against {} to see if it matches is {}",
642 proxyName, item_key, keyMatch));
643 }
644
645 // Now check if this item is marked for another output stream, if so we reject it
646 // We also reject keys that are marked transient at this point
647 bool xkeyMatch = false;
648 if( (!stream.empty() and stream != m_outputName) || SG::isTransientKey(proxyName) ) {
649 // reject keys that are marked for a different output stream
650 ATH_MSG_DEBUG(std::format("Rejecting key: {} in output: {}", itemProxy->name(), m_outputName.toString()));
651 xkeyMatch = true;
652 }
653
654 // All right, it passes key match find in itemList, but not in excludeList
655 if (keyMatch && !xkeyMatch) {
656 if (m_forceRead && itemProxy->isValid()) {
657 if (nullptr == itemProxy->accessData()) {
658 ATH_MSG_ERROR(std::format(" Could not get data object for id {},\"{}\"", remapped_item_id, proxyName));
659 }
660 }
661 if (nullptr != itemProxy->object()) {
662 if( std::find(m_objects.begin(), m_objects.end(), itemProxy->object()) == m_objects.end() &&
663 std::find(m_altObjects.begin(), m_altObjects.end(), itemProxy->object()) == m_altObjects.end() )
664 {
665 if( item_id != remapped_item_id ) {
666 // For MetaCont<T>: -
667 // create a temporary DataObject for an entry in the container to pass to CnvSvc
668 DataBucketBase* dbb = static_cast<DataBucketBase*>( itemProxy->object() );
669 const MetaContBase* metaCont = static_cast<MetaContBase*>( dbb->cast( ClassID_traits<MetaContBase>::ID() ) );
670 void* obj = metaCont? metaCont->getAsVoid( m_outSeqSvc->currentRangeID() ) : nullptr;
671 if( obj ) {
672 auto altbucket = std::make_unique<AltDataBucket>(
673 obj, item_id, *CLIDRegistry::CLIDToTypeinfo(item_id), proxyName );
674 m_objects.push_back( altbucket.get() );
675 m_ownedObjects.push_back( std::move(altbucket) );
676 m_altObjects.push_back( itemProxy->object() ); // only for duplicate prevention
677 } else {
678 ATH_MSG_ERROR(std::format("Failed to retrieve object from MetaCont with key={}, for EventRangeID={}",
679 item_key, m_outSeqSvc->currentRangeID()));
680 return StatusCode::FAILURE;
681 }
682 } else if (item.exact()) {
683 // If the exact flag is set, make a new DataObject
684 // holding the object as the requested type.
685 DataBucketBase* dbb = dynamic_cast<DataBucketBase*> (itemProxy->object());
686 if (!dbb) std::abort();
687 void* ptr = dbb->cast (item_id);
688 if (!ptr) {
689 // Hard cast
690 ptr = dbb->object();
691 }
692 auto altbucket =
693 std::make_unique<AltDataBucket>
694 (ptr, item_id,
696 *itemProxy);
697 m_objects.push_back(altbucket.get());
698 m_ownedObjects.push_back (std::move(altbucket));
699 m_altObjects.push_back (itemProxy->object());
700 }
701 else
702 m_objects.push_back(itemProxy->object());
703 ATH_MSG_DEBUG(std::format(" Added object {},\"{}\"", item_id, proxyName));
704 }
705
709 if ((*m_currentStore)->storeID() == StoreID::EVENT_STORE &&
710 item_key.find( RootAuxDynIO::AUX_POSTFIX ) == ( item_key.size() - 4 )) {
711
712 const SG::IConstAuxStore* auxstore( nullptr );
713 try {
714 SG::fromStorable( itemProxy->object(), auxstore, true );
715 } catch( const std::exception& ) {
716 ATH_MSG_DEBUG(std::format("Error in casting object with CLID {} to SG::IConstAuxStore*", itemProxy->clID()));
717 auxstore = nullptr;
718 }
719
720 if (auxstore) {
721 handleVariableSelection (*auxstore, *itemProxy,
722 aux_attr, vetoes);
723
724 // Here comes the compression logic using ThinningInfo
725 // Get a hold of all AuxIDs for this store (static, dynamic etc.)
726 const SG::auxid_set_t allVars = auxstore->getAuxIDs();
727
728 // Get a handle on the compression information for this store
729 std::string key = item_key;
730 key.erase (key.size()-4, 4);
731
732 // Build the compression list, retrieve the relevant AuxIDs and
733 // store it in the relevant map that is going to be inserted into
734 // the ThinningCache later on by the ThinningCacheTool
735 xAOD::AuxCompression compression;
736 compression.setCompressedAuxIDs( comp_attr_map );
737 for( const auto& it : compression.getCompressedAuxIDs( allVars ) ) {
738 if( it.second.size() > 0 ) { // insert only if the set is non-empty
739 compInfo[ key ][ it.first ] = it.second;
740 ATH_MSG_DEBUG(std::format("Container {} has {} variables that'll be "
741 "lossy float compressed with {} mantissa bits",
742 key, it.second.size(), it.first));
743 }
744 } // End of loop over variables to be lossy float compressed
745 } // End of lossy float compression logic
746
747 }
748
749 added = true;
750 }
751 } else if (keyMatch && xkeyMatch) {
752 removed = true;
753 }
754 } // proxy loop
755 if (!added && !removed) {
756 ATH_MSG_DEBUG(std::format(" No object matching {},\"{}\" found", item_id, item_key));
757 } else if (removed) {
758 ATH_MSG_DEBUG(std::format(" Object being excluded based on property setting {},\"{}\". Skipping",
759 item_id, item_key));
760 }
761 } else {
762 ATH_MSG_DEBUG(std::format(" Failed to receive proxy iterators from StoreGate for {},\"{}\". Skipping",
763 item_id, item_key));
764 }
765 return StatusCode::SUCCESS;
766}
767
773std::set<std::string>
774AthenaOutputStream::buildCompressionSet (const ToolHandle<SG::IFolder>& handle,
775 const CLID& item_id,
776 const std::string& item_key) const
777{
778 // Create an empty result
779 std::set<std::string> result;
780
781 // Check the item is indeed Aux.
782 if(item_key.find("Aux.") == std::string::npos) {
783 return result;
784 }
785
786 // First the high compression list
787 for (const auto& iter : *handle) {
788 // First match the IDs for early rejection.
789 if (iter.id() != item_id) {
790 continue;
791 }
792 // Then find the compression item key and the compression list string
793 size_t seppos = iter.key().find('.');
794 std::string comp_item_key{""}, comp_str{""};
795 if(seppos != std::string::npos) {
796 comp_item_key = iter.key().substr(0, seppos+1);
797 comp_str = iter.key().substr(seppos+1);
798 } else {
799 comp_item_key = iter.key();
800 }
801 // Proceed only if the keys match and the
802 // compression list string is not empty
803 if (!comp_str.empty() && comp_item_key == item_key) {
804 std::stringstream ss(comp_str);
805 std::string attr;
806 while( std::getline(ss, attr, '.') ) {
807 result.insert(attr);
808 }
809 }
810 }
811
812 // All done, return the result
813 return result;
814}
815
818 SG::DataProxy& itemProxy,
819 const std::string& aux_attr,
820 SG::SelectionVetoes& vetoes) const
821{
822 // Collect dynamic Aux selection (parse the line, attributes separated by dot)
823 std::set<std::string> attributes;
824 if( aux_attr.size() ) {
825 std::stringstream ss(aux_attr);
826 std::string attr;
827 while( std::getline(ss, attr, '.') ) {
828 attributes.insert(attr);
829 }
830 }
831
832 // Return early if there's no selection.
833 if (attributes.empty()) {
834 return;
835 }
836
837 std::string key = itemProxy.name();
838 if (key.size() >= 4 && key.compare (key.size()-4, 4, "Aux.")==0)
839 {
840 key.erase (key.size()-4, 4);
841 }
842
843 // Find the entry for the selection.
844 SG::auxid_set_t& vset = vetoes[key];
845
846 // Form the veto mask for this object.
848 sel.selectAux (attributes);
849
850 // Get all the AuxIDs that we know of and the selected ones
851 SG::auxid_set_t all = auxstore.getAuxIDs();
852 SG::auxid_set_t selected = sel.getSelectedAuxIDs( all );
853
854 // Loop over all and build a list of vetoed AuxIDs from non selected ones
855 for( const SG::auxid_t auxid : all ) {
856 if ( !selected.test( auxid ) ) {
857 vset.insert( auxid );
858 }
859 }
860}
861
862// Here comes the list handlers...
863void AthenaOutputStream::itemListHandler(Gaudi::Details::PropertyBase& /* theProp */) {
864 // Assuming concrete SG::Folder also has an itemList property
865 IProperty *pAsIProp(nullptr);
866 if ((m_p2BWritten.retrieve()).isFailure() ||
867 nullptr == (pAsIProp = dynamic_cast<IProperty*>(&*m_p2BWritten)) ||
868 (pAsIProp->setProperty(m_itemList)).isFailure()) {
869 throw GaudiException("Folder property [itemList] not found", name(), StatusCode::FAILURE);
870 }
871}
872
873void AthenaOutputStream::compressionListHandlerHigh(Gaudi::Details::PropertyBase& /* theProp */) {
874 IProperty *pAsIProp(nullptr);
875 if ((m_compressionDecoderHigh.retrieve()).isFailure() ||
876 nullptr == (pAsIProp = dynamic_cast<IProperty*>(&*m_compressionDecoderHigh)) ||
877 (pAsIProp->setProperty("ItemList", m_compressionListHigh.toString())).isFailure()) {
878 throw GaudiException("Folder property [ItemList] not found", name(), StatusCode::FAILURE);
879 }
880}
881
882void AthenaOutputStream::compressionListHandlerLow(Gaudi::Details::PropertyBase& /* theProp */) {
883 IProperty *pAsIProp(nullptr);
884 if ((m_compressionDecoderLow.retrieve()).isFailure() ||
885 nullptr == (pAsIProp = dynamic_cast<IProperty*>(&*m_compressionDecoderLow)) ||
886 (pAsIProp->setProperty("ItemList", m_compressionListLow.toString())).isFailure()) {
887 throw GaudiException("Folder property [ItemList] not found", name(), StatusCode::FAILURE);
888 }
889}
890
891// Reinitialize the internal state of the algorithm
892// for I/O purposes (e.g. upon @c fork(2))
894 ATH_MSG_INFO("I/O reinitialization...");
895 m_incidentSvc->removeListener(this, "MetaDataStop"); // Remove any existing listener to avoid handling the incident multiple times
896 m_incidentSvc->addListener(this, "MetaDataStop", 50);
897 for (auto& tool : m_helperTools) {
898 if (!tool->postInitialize().isSuccess()) {
899 ATH_MSG_ERROR("Cannot initialize helper tool");
900 }
901 }
902 return StatusCode::SUCCESS;
903}
904
905// Finalize the internal state of the algorithm
906// for I/O purposes (e.g. upon @c fork(2))
908 ATH_MSG_INFO("I/O finalization...");
909 for (auto& tool : m_helperTools) {
910 if (!tool->preFinalize().isSuccess()) {
911 ATH_MSG_ERROR("Cannot finalize helper tool");
912 }
913 }
914 const Incident metaDataStopIncident(name(), "MetaDataStop");
915 this->handle(metaDataStopIncident);
916 m_incidentSvc->removeListener(this, "MetaDataStop");
917 if (m_dataStore->clearStore().isFailure()) {
918 ATH_MSG_WARNING("Cannot clear the DataStore");
919 }
920 return StatusCode::SUCCESS;
921}
922
929{
930 m_dictLoader->load_type (clid);
931
932 // Also load the persistent class dictionary, if applicable.
933 std::unique_ptr<ITPCnvBase> tpcnv = m_tpCnvSvc->t2p_cnv_unique (clid);
934 if (tpcnv) {
935 m_dictLoader->load_type (tpcnv->persistentTInfo());
936 }
937}
938
940bool AthenaOutputStream::simpleMatch(const std::string& pattern,
941 const std::string& text) {
942 size_t pi = 0, ti = 0, star = std::string::npos, match = 0;
943 while (ti < text.size()) {
944 if (pi < pattern.size() && (pattern[pi] == text[ti] || pattern[pi] == '*')) {
945 if (pattern[pi] == '*') { star = pi++; match = ti; }
946 else { ++pi; ++ti; }
947 } else if (star != std::string::npos) {
948 pi = star + 1;
949 ti = ++match;
950 } else return false;
951 }
952 while (pi < pattern.size() && pattern[pi] == '*') ++pi;
953 return pi == pattern.size();
954}
#define ATH_CHECK
Evaluate an expression and check for errors.
#define ATH_MSG_ERROR(x)
#define ATH_MSG_FATAL(x)
#define ATH_MSG_INFO(x)
#define ATH_MSG_VERBOSE(x)
#define ATH_MSG_WARNING(x)
#define ATH_MSG_DEBUG(x)
a static registry of CLID->typeName entries.
This file contains the class definition for the DataHeader and DataHeaderElement classes.
uint32_t CLID
The Class ID type.
Interface providing I/O for a generic auxiliary store.
Interface for non-const operations on an auxiliary store.
Interface for const operations on an auxiliary store.
static Double_t ss
Handle class for recording to StoreGate.
#define pi
IDataSelector m_objects
Collection of objects being selected.
ServiceHandle< StoreGateSvc > m_metadataStore
virtual StatusCode finalize() override
StringProperty m_streamName
Stream name (defaults to algorithm name)
UnsignedIntegerProperty m_compressionBitsLow
Number of mantissa bits in the float compression.
UnsignedIntegerProperty m_compressionBitsHigh
Number of mantissa bits in the float compression.
StringArrayProperty m_transientItems
List of items that are known to be present in the transient store (and hence we can make input depend...
ToolHandle< SG::IFolder > m_compressionDecoderLow
The top-level folder with items to be compressed low.
ToolHandle< SG::IFolder > m_p2BWritten
The top-level folder with items to be written.
StringArrayProperty m_compressionListLow
Vector of item names.
ToolHandle< IAthenaOutputStreamTool > m_streamer
pointer to AthenaOutputStreamTool
ServiceHandle< MetaDataSvc > m_metaDataSvc
Handles to all the necessary services.
BooleanProperty m_itemListFromTool
Set to write out everything in input DataHeader.
StringProperty m_outputName
Name of the output file.
virtual ~AthenaOutputStream()
Standard Destructor.
std::map< std::string, std::unique_ptr< IAthenaOutputStreamTool > > m_streamerMap
map of streamerTools handling event ranges in MT
std::map< unsigned, std::string > m_slotRangeMap
map of filenames assigned to active slots
virtual void handle(const Incident &incident) override
Incident service handle listening for MetaDataStop.
std::set< std::string > buildCompressionSet(const ToolHandle< SG::IFolder > &handle, const CLID &item_id, const std::string &item_key) const
Helper function for building the compression lists.
AthenaOutputStream(const std::string &name, ISvcLocator *pSvcLocator)
Standard algorithm Constructor.
ToolHandleArray< IAthenaOutputTool > m_helperTools
vector of AlgTools that that are executed by this stream
ToolHandle< SG::IFolder > m_compressionDecoderHigh
The top-level folder with items to be compressed high.
void clearSelection()
Clear list of selected objects.
StringArrayProperty m_itemList
Vector of item names.
ServiceHandle< IClassIDSvc > m_pCLIDSvc
ServiceHandle< IIncidentSvc > m_incidentSvc
void handleVariableSelection(const SG::IConstAuxStore &auxstore, SG::DataProxy &itemProxy, const std::string &aux_attr, SG::SelectionVetoes &vetoes) const
Here we build the vetoed AuxIDs.
ServiceHandle< IDictLoaderSvc > m_dictLoader
IDataSelector m_altObjects
Objects overridden by ‘exact’ handling.
void compressionListHandlerLow(Gaudi::Details::PropertyBase &)
Handler for ItemNames Property.
StatusCode addItemObjects(const SG::FolderItem &, SG::SelectionVetoes &vetoes, SG::CompressionInfo &compInfo)
Add item data objects to output streamer list.
StringProperty m_persName
Name of the persistency service capable to write data from the store.
BooleanProperty m_forceRead
set to true to force read of data objects in item list
void loadDict(CLID clid)
Helper function to load dictionaries (both transient and persistent) for a given type.
ServiceHandle< ITPCnvSvc > m_tpCnvSvc
StatusCode collectAllObjects()
Collect data objects for output streamer list.
std::string m_outputAttributes
Output attributes.
StringArrayProperty m_compressionListHigh
Vector of item names.
ServiceHandle< StoreGateSvc > * m_currentStore
StringArrayProperty m_metadataItemList
Vector of item names.
std::vector< std::unique_ptr< DataObject > > m_ownedObjects
Collection of DataObject instances owned by this service.
ServiceHandle< OutputStreamSequencerSvc > m_outSeqSvc
std::map< std::string, std::string > m_rangeIDforRangeFN
map of RangeIDs (as used by the Sequencer) for each Range filename generated
ToolHandle< SG::IFolder > m_transient
Decoded list of transient ids.
ServiceHandle< StoreGateSvc > m_dataStore
Handle to the StoreGateSvc store where the data we want to write out resides.
virtual StatusCode initialize() override
mutex_t m_mutex
mutex for this Stream write() and handle() methods
virtual StatusCode execute() override
virtual StatusCode io_reinit() override
Callback method to reinitialize the internal state of the component for I/O purposes (e....
SG::WriteHandleKey< SG::CompressionInfo > m_compInfoKey
Key used for recording lossy float compressed variable information to the event store.
bool simpleMatch(const std::string &pattern, const std::string &text)
Glob-style matcher, where the only meta-character is '*'.
void compressionListHandlerHigh(Gaudi::Details::PropertyBase &)
Handler for ItemNames Property.
SG::WriteHandleKey< SG::SelectionVetoes > m_selVetoesKey
Key used for recording selected dynamic variable information to the event store.
virtual StatusCode io_finalize() override
virtual StatusCode write()
Stream the data.
BooleanProperty m_extendProvenanceRecord
Set to false to omit adding the current DataHeader into the DataHeader history This will cause the in...
void finalizeRange(const std::string &rangeFN)
std::atomic< int > m_events
Number of events written to this output stream.
void itemListHandler(Gaudi::Details::PropertyBase &)
Handler for ItemNames Property.
void writeMetaData(const std::string &outputFN="")
Write MetaData for this stream (by default) or for a substream outputFN (in ES mode)
static const std::type_info * CLIDToTypeinfo(CLID clid)
Translate between CLID and type_info.
bool test(bit_t bit) const
Test to see if a bit is set.
ConcurrentBitset & insert(bit_t bit, bit_t new_nbits=0)
Set a bit to 1.
A non-templated base class for DataBucket, allows to access the transient object address as a void*.
virtual void * object()=0
T * cast(SG::IRegisterTransient *irt=0, bool isConst=true)
Return the contents of the DataBucket, converted to type T.
virtual StatusCode initialize()
This is a tool that allows streaming out of DataObjects.
virtual StatusCode connectServices(const std::string &dataStore, const std::string &cnvSvc, bool extendProvenenceRecord=false)=0
Specify which data store and conversion service to use and whether to extend provenence Only use if o...
virtual StatusCode streamObjects(const TypeKeyPairs &typeKeys, const std::string &outputName="")=0
virtual StatusCode connectOutput(const std::string &outputName="")=0
Connect to the output stream Must connectOutput BEFORE streaming Only specify "outputName" if one wan...
virtual StatusCode commitOutput(bool doCommit=false)=0
Commit the output stream after having streamed out objects Must commitOutput AFTER streaming.
virtual void * getAsVoid(const SourceID &sid) const =0
CLID clID() const
Retrieve clid.
virtual const name_type & name() const override final
Retrieve data object key == string.
bool isValid() const
called by destructor
DataObject * accessData()
Access DataObject on-demand using conversion service.
bool hasAlias(const std::string &key) const
Test to see if a given string is in the alias set.
a Folder item (data object) is identified by the clid/key pair
Interface for const operations on an auxiliary store.
virtual const SG::auxid_set_t & getAuxIDs() const =0
Return a set of identifiers for existing data items in this store.
A set of aux data identifiers.
Definition AuxTypes.h:47
@ EVENT_STORE
Definition StoreID.h:26
STL class.
virtual std::map< unsigned int, SG::auxid_set_t > getCompressedAuxIDs(const SG::auxid_set_t &fullset) const
Return those variables that are selected to be compressed per compression setting.
virtual void setCompressedAuxIDs(const std::map< unsigned int, std::set< std::string > > &attributes)
Set which variables should be compressed per compression setting.
Class helping in dealing with dynamic branch selection.
bool match(std::string s1, std::string s2)
match the individual directories of two strings
Definition hcg.cxx:357
constexpr char AUX_POSTFIX[]
Common post-fix for the names of auxiliary containers in StoreGate.
std::unordered_map< std::string, SG::auxid_set_t > SelectionVetoes
Map of vetoed variables.
std::map< std::string, DataProxy * > ProxyMap
Definition ProxyMap.h:22
bool fromStorable(DataObject *pDObj, T *&pTrans, bool quiet=false, IRegisterTransient *irt=0, bool isConst=true)
ProxyMap::const_iterator ConstProxyIterator
Definition ProxyMap.h:24
std::unordered_map< std::string, SG::ThinningInfo::compression_map_t > CompressionInfo
Map of compressed variables and their compression levels.
bool isTransientKey(const std::string &key)
Test to see if a key is transoent.
SG::ReadCondHandle< T > makeHandle(const SG::ReadCondHandleKey< T > &key, const EventContext &ctx=Gaudi::Hive::currentContext())
size_t auxid_t
Identifier for a particular aux data item.
Definition AuxTypes.h:27
STL namespace.