navigation2dot.TE Class Reference

Collaboration diagram for navigation2dot.TE:

Public Member Functions
	__init__ (self, s)
	node (self)
	edges (self)
	__str__ (self)

Public Attributes
	tename = teName(tok[0].split(':')[1])
	active = bool(int(tok[1].split(':')[1]))
	error = bool(int(tok[2].split(':')[1]))
	ptr = tok[3].split(':')[1]
	roi = tok[5].split(':')[1]
list	relations = []
bool	terminal = False
list	features = []

Detailed Description

Definition at line 66 of file navigation2dot.py.

Constructor & Destructor Documentation

__init__()

navigation2dot.TE.__init__	(		self,
			s )

Definition at line 67 of file navigation2dot.py.

    def __init__(self, s):
        # print s
        # this si typical line it has to deal with: id:0;active:1;error:0;ptr:0x9606b98;#seeds:4,0x9606ce0 0x9607338 0x96075b0 0x96077e8 #seededBy:0;#RoI:0;#features:1 CLID:242645981 idx:0:0:1 label:"OPI_L2";
        tok = s.split(';')
        #print tok
        self.tename = teName(tok[0].split(':')[1])
        self.active = bool(int(tok[1].split(':')[1]))
        self.error  = bool(int(tok[2].split(':')[1]))
        self.ptr    = tok[3].split(':')[1]
        self.roi    = tok[5].split(':')[1]
        # find out relations
        self.relations = []
        self.terminal = False
        seeds = tok[4].split(',')[0].split(':')[1]
        if seeds is '0':
            self.terminal = True
        else:
            self.relations = tok[4].split(',')[1].split(' ')[0:-1]
        
        # find out features attached
        #print tok
        self.features = []
        global options
        passed=False
        if options['drawFeatures']:
            for part in tok:
                if 'keyprints' in part:
                    passed=True
                clid = 0
                label = ''
                idx=''
                for field in  part.split(" "):
                    if field.find("CLID") is not -1:
                        clid = field.split(":")[1].lstrip(' ').lstrip(' ')
                    elif field.find("label") is not -1:
                        label = field.split(":")[1].rstrip("\"").lstrip("\"")
                    elif field.find("idx") is not -1:
                        idx=field
                if clid is not 0:
                    #print (featureClassName(clid), label, idx, passed)
                    self.features.append( (featureClassName(clid), label, idx, ('','*')[passed]) )
                    
        # print self.features
        
        # print self.tename, self.active, self.ptr, self.relations
 

Member Function Documentation

__str__()

navigation2dot.TE.__str__

(

self

)

Definition at line 156 of file navigation2dot.py.

    def __str__(self):
        r = self.node()
        if r:
            return r + self.edges()
        else:
            return ""
    
 

edges()

navigation2dot.TE.edges

(

self

)

Draws node and edges. 

Definition at line 149 of file navigation2dot.py.

    def edges (self):
        """ Draws node and edges. """
        line = ''
        for rel in self.relations:
            line += 'X'+self.ptr + ' -> X' + rel + '\n'
        return line
 

node()

navigation2dot.TE.node

(

self

)

Draws node of the graph. 

Definition at line 113 of file navigation2dot.py.

    def node(self):
        """ Draws node of the graph. """
        global options
        
        if options['regex'].search(self.tename) == None and self.tename != '0':
            #            print "rejecting TE which of name ", self.tename, ' due to regex'
            return None
        
        nodename = 'X'+ str(self.ptr)
        line =  nodename +' [  label="{TE: ' + self.tename
        
        line += reduce(lambda x,y: x + "|"+y[0]+ "(" +y[1] + ' '+ y[2]+str(y[3])+")", self.features, "")
        line += '}", style=filled, '
 
        # special nodes 
        if self.tename is '0':
            line += 'fillcolor=pink, '            
        else:
            if self.active:
                line += 'color=green, '
            else:
                line += 'color=plum, '
            
            # error color scheme
            if self.error:
                line += 'fillcolor=red, '
            else:
                line += 'fillcolor=palegreen, '
 
 
 
 
        line += 'shape=record'
        line += ']\n'
        return line
    

Member Data Documentation

active

navigation2dot.TE.active = bool(int(tok[1].split(':')[1]))

Definition at line 73 of file navigation2dot.py.

error

navigation2dot.TE.error = bool(int(tok[2].split(':')[1]))

Definition at line 74 of file navigation2dot.py.

features

list navigation2dot.TE.features = []

Definition at line 88 of file navigation2dot.py.

ptr

navigation2dot.TE.ptr = tok[3].split(':')[1]

Definition at line 75 of file navigation2dot.py.

relations

list navigation2dot.TE.relations = []

Definition at line 78 of file navigation2dot.py.

roi

navigation2dot.TE.roi = tok[5].split(':')[1]

Definition at line 76 of file navigation2dot.py.

tename

navigation2dot.TE.tename = teName(tok[0].split(':')[1])

Definition at line 72 of file navigation2dot.py.

terminal

bool navigation2dot.TE.terminal = False

Definition at line 79 of file navigation2dot.py.

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The documentation for this class was generated from the following file:

• navigation2dot.py