ZDCFitWrapper.cxx

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/*
  Copyright (C) 2002-2024 CERN for the benefit of the ATLAS collaboration
*/
 
#include <numeric>
#include <memory>
#include "ZdcAnalysis/ZDCFitWrapper.h"
 
void ZDCFitWrapper::Initialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  // Clear the errors on the TF1 because retaining the errors seems to affect 
  //   the convergence of fits
  //
  unsigned int npar = GetWrapperTF1()->GetNpar();
  std::vector<double> zeroVec(npar, 0.0);
  GetWrapperTF1()->SetParErrors(&zeroVec[0]);
 
  // If we adjusted the time range on the previous event, restore to default
  //
  if (m_adjTLimitsEvent) {
    SetT0FitLimits(m_t0Min, m_t0Max);
 
    m_adjTLimitsEvent = false;
    m_tminAdjust = 0;
  }
 
  SetAmpMinMax(ampMin, ampMax);
 
  DoInitialize(initialAmp, initialT0, ampMin, ampMax);
}
 
void ZDCFitWrapper::Initialize(float initialAmp, float initialT0, float ampMin, float ampMax, float fitTmin, float fitTmax, float fitTRef)
{
  // Clear the errors on the TF1 because retaining the errors seems to affect 
  //   the convergence of fits
  //
  unsigned int npar = GetWrapperTF1()->GetNpar();
  std::vector<double> zeroVec(npar, 0.0);
  GetWrapperTF1()->SetParErrors(&zeroVec[0]);
 
  m_adjTLimitsEvent = true;
 
  m_tminAdjust = fitTRef; // Note: this is the time corresponding to the sample used for presample subtraction 
 
  m_tempTmin = std::max(m_t0Min, fitTmin);
  m_tempTmax = std::min(m_t0Max, fitTmax);
  
  SetAmpMinMax(ampMin, ampMax);
  SetT0FitLimits(m_tempTmin, m_tempTmax);
 
  DoInitialize(initialAmp, initialT0, ampMin, ampMax);
}
 
ZDCFitExpFermiVariableTaus::ZDCFitExpFermiVariableTaus(const std::string& tag, float tmin, float tmax, bool fixTau1, bool fixTau2, float tau1, float tau2) :
  ZDCFitWrapper(std::make_shared<TF1>(("ExpFermiVariableTaus" + tag).c_str(), ZDCFermiExpFit, tmin, tmax, 5)),
  m_fixTau1(fixTau1), m_fixTau2(fixTau2), m_tau1(tau1), m_tau2(tau2)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "#tau_{1}");
  theTF1->SetParName(3, "#tau_{2}");
  theTF1->SetParName(4, "C");
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, 3, 6);
  theTF1->SetParLimits(3, 10, 40);
 
  if (m_fixTau1) theTF1->FixParameter(2, m_tau1);
  if (m_fixTau2) theTF1->FixParameter(3, m_tau2);
}
 
void ZDCFitExpFermiVariableTaus::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  theTF1->SetParameter(0, initialAmp);
  theTF1->SetParameter(1, initialT0);
  theTF1->SetParameter(4, 0);
 
  theTF1->SetParLimits(0, ampMin, ampMax);
 
  if (!m_fixTau1) theTF1->SetParameter(2, m_tau1);
  if (!m_fixTau2) theTF1->SetParameter(3, m_tau2);
}
 
void ZDCFitExpFermiVariableTaus::SetT0FitLimits(float t0Min, float t0Max)
{
  // Set the parameter limits accordingly on the TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
void ZDCFitExpFermiVariableTaus::ConstrainFit()
{
  // We force the constant terms to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(4, 0);
}
void ZDCFitExpFermiVariableTaus::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(4);
}
 
ZDCFitExpFermiVariableTausRun3::ZDCFitExpFermiVariableTausRun3(const std::string& tag, float tmin, float tmax, bool fixTau1, bool fixTau2, float tau1, float tau2) :
  ZDCFitExpFermiVariableTaus(tag, tmin, tmax, fixTau1, fixTau2, tau1, tau2)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParLimits(2, 0.5, 3);
  theTF1->SetParLimits(3, 4, 10);
 
  // Since we st parameter ranges, we have to redo the fixing (or not) again here
  //
  if (m_fixTau1) theTF1->FixParameter(2, m_tau1);
  if (m_fixTau2) theTF1->FixParameter(3, m_tau2);
}
 
 
ZDCFitExpFermiVariableTausLHCf::ZDCFitExpFermiVariableTausLHCf(const std::string& tag, float tmin, float tmax, bool fixTau1, bool fixTau2, float tau1, float tau2) :
  ZDCFitWrapper(std::make_shared<TF1>(("ExpFermiVariableTausLHCf" + tag).c_str(), ZDCFermiExpFitRefl, tmin, tmax, 9)),
  m_fixTau1(fixTau1), m_fixTau2(fixTau2), m_tau1(tau1), m_tau2(tau2)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "#tau_{1}");
  theTF1->SetParName(3, "#tau_{2}");
  theTF1->SetParName(4, "C");
  theTF1->SetParName(5, "refdelay");
  theTF1->SetParName(6, "reflAmpFrac");
  theTF1->SetParName(7, "reflWidth");
  theTF1->SetParName(8, "delta");
 
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(4, -100, 100);
  theTF1->SetParLimits(6, -1e-4, 0.35);
 
  theTF1->FixParameter(5, 6.5);
  theTF1->FixParameter(7, 1.5);
  theTF1->FixParameter(8, 0.01);
 
  if (m_fixTau1) theTF1->FixParameter(2, m_tau1);
  else theTF1->SetParLimits(2, 1, 2);
    
  if (m_fixTau2) theTF1->FixParameter(3, m_tau2);
  else theTF1->SetParLimits(3, 3.5, 6);
}
 
void ZDCFitExpFermiVariableTausLHCf::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  theTF1->SetParameter(0, initialAmp);
 
  float t0 = initialT0;
  if (t0 < GetT0Min()) t0 = GetT0Min()*1.1;
  if (t0 > GetT0Max()) t0 = GetT0Max()/1.1;
  theTF1->SetParameter(1, t0);
 
  theTF1->SetParameter(1, initialT0);
  theTF1->SetParameter(4, 0);
  theTF1->SetParameter(6, 0.1);
 
  theTF1->SetParLimits(0, ampMin, ampMax);
 
  if (!m_fixTau1) theTF1->SetParameter(2, m_tau1);
  if (!m_fixTau2) theTF1->SetParameter(3, m_tau2);
 
  // Set the parameter errors which ROOT now uses <<<to set the initial step sizes>>>
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  
  theTF1->SetParError(0, ampStep);
  theTF1->SetParError(1, 1.0);
 
  if (!m_fixTau1) theTF1->SetParError(2, 0.05);
  if (!m_fixTau2) theTF1->SetParError(3, 0.25);
 
  theTF1->SetParError(4, 2);
  theTF1->SetParError(5, 0.25);
  theTF1->SetParError(6, 0.05);
}
 
void ZDCFitExpFermiVariableTausLHCf::SetT0FitLimits(float t0Min, float t0Max)
{
  // Set the parameter limits accordingly on the TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
void ZDCFitExpFermiVariableTausLHCf::ConstrainFit()
{
  // We force the constant and reflection terms to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(4, 0);
  theTF1->FixParameter(6, 0);
}
void ZDCFitExpFermiVariableTausLHCf::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(4);
  theTF1->SetParameter(4, 0);
 
  theTF1->ReleaseParameter(6);
  theTF1->SetParLimits(6, -1e-4, 0.35);
  theTF1->SetParameter(6, 0.1);
}
 
ZDCFitExpFermiVariableTausInduct::ZDCFitExpFermiVariableTausInduct(const std::string& tag, float tmin, float tmax, bool fixTau1, bool fixTau2, float tau1, float tau2) :
  ZDCFitWrapper(std::make_shared<TF1>(("ExpFermiVariableTausInduct" + tag).c_str(), ZDCFermiExpFitInduct, tmin, tmax, 10)),
  m_fixTau1(fixTau1), m_fixTau2(fixTau2), m_tau1(tau1), m_tau2(tau2)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "#tau_{1}");
  theTF1->SetParName(3, "#tau_{2}");
  theTF1->SetParName(4, "C");
  theTF1->SetParName(5, "period");
  theTF1->SetParName(6, "IndA");
  theTF1->SetParName(7, "IndB");
  theTF1->SetParName(8, "tauI");
  theTF1->SetParName(9, "delta");
 
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(4, -50, 50);
  theTF1->SetParLimits(5, 10, 50);
  theTF1->SetParLimits(6, 0, 2);
  theTF1->SetParLimits(7, 0, 2);
  //  theTF1->SetParLimits(8, 1, 6);
  theTF1->FixParameter(8, 5.5);
  theTF1->FixParameter(5, 16);
  //  theTF1->SetParLimits(9, 0, 0.05);
 
  
  FixDelta(0.015);
  
  if (m_fixTau1) theTF1->FixParameter(2, m_tau1);
  else theTF1->SetParLimits(2, 0.5, 3);
    
  if (m_fixTau2) theTF1->FixParameter(3, m_tau2);
  else theTF1->SetParLimits(3, 3.5, 8);
}
 
void ZDCFitExpFermiVariableTausInduct::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  theTF1->SetParameter(0, initialAmp);
  theTF1->SetParLimits(0, ampMin, ampMax);
 
  float t0 = initialT0;
  if (t0 < GetT0Min()) t0 = GetT0Min()*1.1;
  if (t0 > GetT0Max()) t0 = GetT0Max()/1.1;
  theTF1->SetParameter(1, t0);
 
  theTF1->SetParameter(6, 0.25);
  theTF1->SetParameter(7, 0.8);
  if (!m_fixDelta) theTF1->SetParameter(9, 0.);
 
  if (!m_fixTau1) theTF1->SetParameter(2, m_tau1);
  if (!m_fixTau2) theTF1->SetParameter(3, m_tau2);
 
  // Set the parameter errors which ROOT now uses <<<to set the initial step sizes>>>
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  
  theTF1->SetParError(0, ampStep);
  theTF1->SetParError(1, 1.0);
 
  if (!m_fixTau1) theTF1->SetParError(2, 0.05);
  if (!m_fixTau2) theTF1->SetParError(3, 0.25);
 
  theTF1->SetParError(4, 1);
  theTF1->SetParError(5, 5);
  theTF1->SetParError(6, 0.1);
  theTF1->SetParError(7, 0.1);
}
 
void ZDCFitExpFermiVariableTausInduct::SetT0FitLimits(float t0Min, float t0Max)
{
  // Set the parameter limits accordingly on the TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
void ZDCFitExpFermiVariableTausInduct::ConstrainFit()
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->FixParameter(6, 0.25);
  theTF1->FixParameter(4, 0);
  // theTF1->FixParameter(7, 0.1);
}
 
void ZDCFitExpFermiVariableTausInduct::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->ReleaseParameter(6);
  theTF1->ReleaseParameter(4);
  theTF1->SetParLimits(6, 0, 2);
  theTF1->SetParLimits(4, -50, 50);
 
}
 
ZDCFitExpFermiFixedTaus::ZDCFitExpFermiFixedTaus(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCFitWrapper(std::make_shared<TF1>(("ExpFermiFixedTaus" + tag).c_str(), this, tmin, tmax, 3)),
  m_tau1(tau1), m_tau2(tau2)
{
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "C");
 
  // Now create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiFixedTausRefFunc" + tag;
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, -50, 100, 5);
 
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
  m_expFermiFunc->SetParameter(4, 0);
 
  m_norm = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
}
 
void ZDCFitExpFermiFixedTaus::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
}
void ZDCFitExpFermiFixedTaus::ConstrainFit()
{
  // We force the constant tersm to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(2, 0);
}
void ZDCFitExpFermiFixedTaus::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(2);
}
 
void ZDCFitExpFermiFixedTaus::SetT0FitLimits(float t0Min, float t0Max)
{
  GetWrapperTF1()->SetParLimits(1, t0Min, t0Max);
}
 
ZDCFitExpFermiPrePulse::ZDCFitExpFermiPrePulse(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCPrePulseFitWrapper(std::make_shared<TF1>(("ExpFermiPrePulse" + tag).c_str(), this, tmin, tmax, 5)),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiPrePulseRefFunc" + tag;
 
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, -50, 100, 5);
 
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
  m_expFermiFunc->SetParameter(4, 0);
 
  m_norm = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
 
  // Now set up the actual TF1
  //
   std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, 1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(3, -20, 10);
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "T0_{pre}");
  theTF1->SetParName(4, "C");
}
 
void ZDCFitExpFermiPrePulse::ConstrainFit()
{
  // We force the constant term and per-pulse amplitude to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(2, 0);
  theTF1->FixParameter(4, 0);
}
void ZDCFitExpFermiPrePulse::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(2);
  theTF1->ReleaseParameter(4);
 
  theTF1->SetParLimits(2, 1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
}
 
void ZDCFitExpFermiPrePulse::SetPrePulseT0Range(float tmin, float tmax)
{
  if (tmin > GetTMin()) {
    m_preT0Min = tmin;
    GetWrapperTF1()->ReleaseParameter(3);
    GetWrapperTF1()->SetParLimits(3, tmin, tmax);
  }
  else {
    m_preT0Min = -25;
    GetWrapperTF1()->SetParLimits(3, -25, tmax);
  }
  m_preT0Max = tmax;
}
 
void ZDCFitExpFermiPrePulse::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2, 5);
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
  
  // Set parameter errors for fit step size
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, 2);
  GetWrapperTF1()->SetParError(3, 1.0);
  GetWrapperTF1()->SetParError(4, 1.0);
}
 
void ZDCFitExpFermiPrePulse::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
ZDCFitExpFermiPreExp::ZDCFitExpFermiPreExp(const std::string& tag, float tmin, float tmax, float tau1, float tau2,
                           float defExpTau, float fixExpTau) :
  ZDCPreExpFitWrapper(std::make_shared<TF1>(("ExpFermiPreExp" + tag).c_str(), this, tmin, tmax, 6), defExpTau, fixExpTau),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiPreExpRefFunc" + tag;
 
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, tmin, tmax, 8);
 
  // The parameters for the FermiExp
  //
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
  m_expFermiFunc->SetParameter(4, 0);
 
  m_norm = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "tau_{pre}");
  theTF1->SetParName(4, "tausqrt_{pre}");
  theTF1->SetParName(5, "C");
 
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, -1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(3, 6, 30);
  theTF1->SetParLimits(4, -0.2, 0.2);
  theTF1->SetParLimits(5, -50, 50);
}
 
void ZDCFitExpFermiPreExp::ConstrainFit()
{
  // We force the constant term and per-pulse amplitude to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(2, 0);
  theTF1->FixParameter(3, getDefaultExpTau());
  theTF1->FixParameter(5, 0);
}
void ZDCFitExpFermiPreExp::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->ReleaseParameter(2);
  theTF1->SetParLimits(2, -1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
 
  theTF1->ReleaseParameter(3);
  theTF1->SetParLimits(3, 6, 30);
  theTF1->SetParameter(3, getDefaultExpTau());
  
  theTF1->ReleaseParameter(5);
  theTF1->SetParLimits(5, -50, 50);
  theTF1->SetParameter(5, 0);
}
 
void ZDCFitExpFermiPreExp::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2, 0);
  GetWrapperTF1()->SetParameter(3, getDefaultExpTau());
  GetWrapperTF1()->SetParameter(4, 0.);
  GetWrapperTF1()->SetParameter(5, 0);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  // Set parameter errors for fit step size
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, ampStep/2);
  GetWrapperTF1()->SetParError(3, 1.0);
  GetWrapperTF1()->SetParError(4, 0.025);
  GetWrapperTF1()->SetParError(5, 1.0);
}
 
void ZDCFitExpFermiPreExp::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
ZDCFitExpFermiLHCfPreExp::ZDCFitExpFermiLHCfPreExp(const std::string& tag, float tmin, float tmax, float tau1, float tau2,
                           float defExpTau, float fixExpTau) :
  ZDCPreExpFitWrapper(std::make_shared<TF1>(("ExpFermiLHCfPreExp" + tag).c_str(), this, tmin, tmax, 8), defExpTau, fixExpTau),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiLHCfPreExpRefFunc" + tag;
 
  m_expFermiLHCfFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFitRefl, tmin, tmax, 9);
 
  // The parameters for the FermiExpRefl
  //
  m_expFermiLHCfFunc->SetParameter(0, 1);
  m_expFermiLHCfFunc->SetParameter(1, 0);
  m_expFermiLHCfFunc->SetParameter(2, m_tau1);
  m_expFermiLHCfFunc->SetParameter(3, m_tau2);
  m_expFermiLHCfFunc->SetParameter(4, 0);
  m_expFermiLHCfFunc->SetParameter(5, 6.5);
  m_expFermiLHCfFunc->SetParameter(6, 0.1);
  m_expFermiLHCfFunc->SetParameter(7, 1.5);
  m_expFermiLHCfFunc->SetParameter(8, 0.01);
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0"); 
  theTF1->SetParName(2, "Tau1");
  theTF1->SetParName(3, "Tau2");
  theTF1->SetParName(4, "Amp_{pre}");
  theTF1->SetParName(5, "tau_{pre}");
  theTF1->SetParName(6, "bsqrt_{pre}");
  theTF1->SetParName(7, "ReflFrac");
 
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, 1.0, 2);
  theTF1->SetParLimits(3, 3.5, 5.5);
  theTF1->SetParLimits(4, -1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(5, 4, 12);
  theTF1->SetParLimits(6, -0.001, 0.001);
  theTF1->SetParLimits(7, -1.0e-4, 0.3);
}
 
void ZDCFitExpFermiLHCfPreExp::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, std::max(initialAmp, ampMin));
 
  float t0 = initialT0;
  if (t0 < GetT0Min()) t0 = GetT0Min()*1.1;
  if (t0 > GetT0Max()) t0 = GetT0Max()/1.1;
  GetWrapperTF1()->SetParameter(1, t0);
 
  GetWrapperTF1()->SetParameter(2, std::max(m_tau1, (float) 1.01));
  GetWrapperTF1()->SetParameter(3, m_tau2);
  GetWrapperTF1()->SetParameter(4, 0.);
  GetWrapperTF1()->SetParameter(5, std::max(getDefaultExpTau(), (float) 6.01));
  GetWrapperTF1()->SetParameter(6, 0);
  GetWrapperTF1()->SetParameter(7, 0.2);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  // Set parameter errors for fit step size
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, 0.1);
  GetWrapperTF1()->SetParError(3, 0.1);
  GetWrapperTF1()->SetParError(4, 1.0);
  GetWrapperTF1()->SetParError(5, 0.5);
  GetWrapperTF1()->SetParError(6, 0.001);
  GetWrapperTF1()->SetParError(7, 0.01);
}
 
void ZDCFitExpFermiLHCfPreExp::ConstrainFit()
{
  // We force the constant term and per-pulse amplitude to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(5, std::max(getDefaultExpTau(), (float) 6.01));
  theTF1->FixParameter(6, 0);
  theTF1->FixParameter(7, 0.20);
}
void ZDCFitExpFermiLHCfPreExp::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->ReleaseParameter(5);
  theTF1->SetParLimits(5, 6, 12);
  
  theTF1->ReleaseParameter(6);
  theTF1->SetParLimits(6, -0.001, 0.001);
  GetWrapperTF1()->SetParameter(6, 0);
 
  theTF1->ReleaseParameter(7);
  theTF1->SetParLimits(7, -1.0e-4, 0.3);
  GetWrapperTF1()->SetParameter(7, 0.2);
 
}
 
void ZDCFitExpFermiLHCfPreExp::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
ZDCFitExpFermiLHCfPrePulse::ZDCFitExpFermiLHCfPrePulse(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCPrePulseFitWrapper(std::make_shared<TF1>(("ExpFermiLHCfPrePulse" + tag).c_str(), this, tmin, tmax, 7)),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiLHCfPrePulseRefFunc" + tag;
  std::string funcNamePreFunc = "ExpFermiLHCfPrePulsePreFunc" + tag;
 
  m_expFermiLHCfFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFitRefl, tmin, tmax, 9);
  m_expFermiLHCfFunc->SetParameter(0, 1);
  m_expFermiLHCfFunc->SetParameter(1, 0);
  m_expFermiLHCfFunc->SetParameter(2, m_tau1);
  m_expFermiLHCfFunc->SetParameter(3, m_tau2);
  m_expFermiLHCfFunc->SetParameter(4, 0);
  m_expFermiLHCfFunc->SetParameter(5, 6.5);
  m_expFermiLHCfFunc->SetParameter(6, 0.2);
  m_expFermiLHCfFunc->SetParameter(7, 1.5);
  m_expFermiLHCfFunc->SetParameter(8, 0.01);
 
  m_expFermiPreFunc = std::make_shared<TF1>(funcNamePreFunc.c_str(), ZDCFermiExpFit, tmin, tmax, 9);
 
  m_expFermiPreFunc->SetParameter(0, 1);
  m_expFermiPreFunc->SetParameter(1, 0);
  m_expFermiPreFunc->SetParameter(2, m_tau1);
  m_expFermiPreFunc->SetParameter(3, m_tau2);
  m_expFermiPreFunc->SetParameter(4, 0);
  m_preNorm = 1. / m_expFermiPreFunc->GetMaximum();
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  // The actual paerameters we fit
  //
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "tau1");
  theTF1->SetParName(3, "tau2");
  theTF1->SetParName(4, "Amp_{pre}");
  theTF1->SetParName(5, "T0_{pre}");
  theTF1->SetParName(6, "C");
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, 1.0, 2);
  theTF1->SetParLimits(3, 3.5, 5.5);
  theTF1->SetParLimits(4, 1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(5, -20, 10);
  theTF1->SetParLimits(6, -50, 50);
 
}
 
void ZDCFitExpFermiLHCfPrePulse::ConstrainFit()
{
  // We force the constant term and per-pulse amplitude to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(4, 0);
  theTF1->FixParameter(6, 0);
}
void ZDCFitExpFermiLHCfPrePulse::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(4);
  theTF1->ReleaseParameter(6);
 
  theTF1->SetParLimits(4, 1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(6, -50, 50);
}
 
void ZDCFitExpFermiLHCfPrePulse::SetPrePulseT0Range(float tmin, float tmax)
{
  if (tmin > GetTMin()) {
    m_preT0Min = tmin;
    GetWrapperTF1()->ReleaseParameter(5);
    GetWrapperTF1()->SetParLimits(5, tmin, tmax);
  }
  else {
    m_preT0Min = -25;
    GetWrapperTF1()->SetParLimits(5, -25, tmax);
  }
  m_preT0Max = tmax;
}
 
void ZDCFitExpFermiLHCfPrePulse::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2, m_tau1);
  GetWrapperTF1()->SetParameter(3, m_tau2);
  GetWrapperTF1()->SetParameter(4, 5);
  GetWrapperTF1()->SetParameter(5, -10);
  GetWrapperTF1()->SetParameter(6, 0);
  
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
  // Set parameter errors for fit step size
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, 0.05);
  GetWrapperTF1()->SetParError(3, 1);
  GetWrapperTF1()->SetParError(4, 5.0);
  GetWrapperTF1()->SetParError(5, 1.0);
  GetWrapperTF1()->SetParError(6, 2.0);
}
 
void ZDCFitExpFermiLHCfPrePulse::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
ZDCFitExpFermiInductPreExp::ZDCFitExpFermiInductPreExp(const std::string& tag, float tmin, float tmax, float tau1, float tau2,
                           float defExpTau, float fixExpTau) :
  ZDCPreExpFitWrapper(std::make_shared<TF1>(("ExpFermiInductPreExp" + tag).c_str(), this, tmin, tmax, 8), defExpTau, fixExpTau),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiInductPreExpRefFunc" + tag;
 
  m_expFermiInductFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFitInduct, tmin, tmax, 10);
 
  // The parameters for the FermiExpInduct
  //
  m_expFermiInductFunc->SetParameter(0, 1);
  m_expFermiInductFunc->SetParameter(1, 0);
  m_expFermiInductFunc->SetParameter(2, m_tau1); // tau1 is fixed
  m_expFermiInductFunc->SetParameter(3, m_tau2); // tau2 is fixed
  m_expFermiInductFunc->SetParameter(4, 0);      // the constant term will be handled directly not here
  m_expFermiInductFunc->SetParameter(5, 16); // the period will be fixed
  m_expFermiInductFunc->SetParameter(6, 0.25);  // A will be varied as part of the fit
  m_expFermiInductFunc->SetParameter(7, 0.5);  // B will be varied as part of the fit
  m_expFermiInductFunc->SetParameter(8, 5.5);
  m_expFermiInductFunc->SetParameter(9, 0.015);
 
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0"); 
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "tau_{pre}");
  theTF1->SetParName(4, "bsqrt_{pre}");
  theTF1->SetParName(5, "C");
  theTF1->SetParName(6, "IndA");
  theTF1->SetParName(7, "IndB");
 
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, -1, 8196); // Increase the upper range to 2 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(3, 4, 12);
  theTF1->SetParLimits(4, -0.001, 0.001);
  theTF1->SetParLimits(6, 0.0, 1);
  theTF1->SetParLimits(7, 0, 2);
}
 
void ZDCFitExpFermiInductPreExp::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, std::max(initialAmp, ampMin));
 
  float t0 = initialT0;
  if (t0 < GetT0Min()) t0 = GetT0Min()*1.1;
  if (t0 > GetT0Max()) t0 = GetT0Max()/1.1;
  GetWrapperTF1()->SetParameter(1, t0);
 
  GetWrapperTF1()->SetParameter(2, 1);
  GetWrapperTF1()->SetParameter(3, std::max(getDefaultExpTau(), (float) 6.01));
  GetWrapperTF1()->SetParameter(6, 0.2);
  GetWrapperTF1()->SetParameter(7, 0.5);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  // Set parameter errors for fit step size
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, 5.0);
  GetWrapperTF1()->SetParError(3, 0.5);
  GetWrapperTF1()->SetParError(4, 0.01);
  GetWrapperTF1()->SetParError(5, 1);
  GetWrapperTF1()->SetParError(6, 0.05);
  GetWrapperTF1()->SetParError(7, 0.05);
}
 
void ZDCFitExpFermiInductPreExp::ConstrainFit()
{
}
void ZDCFitExpFermiInductPreExp::UnconstrainFit()
{
}
 
void ZDCFitExpFermiInductPreExp::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
ZDCFitExpFermiInductPrePulse::ZDCFitExpFermiInductPrePulse(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCPrePulseFitWrapper(std::make_shared<TF1>(("ExpFermiInductPrePulse" + tag).c_str(), this, tmin, tmax, 7)),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiInductPrePulseRefFunc" + tag;
  std::string funcNamePreFunc = "ExpFermiInductPrePulsePreFunc" + tag;
 
  m_expFermiInductFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFitInduct, tmin, tmax, 9);
  m_expFermiInductFunc->SetParameter(0, 1);
  m_expFermiInductFunc->SetParameter(1, 0);
  m_expFermiInductFunc->SetParameter(2, m_tau1);
  m_expFermiInductFunc->SetParameter(3, m_tau2);
  m_expFermiInductFunc->SetParameter(4, 0);
  m_expFermiInductFunc->SetParameter(5, 16);
  m_expFermiInductFunc->SetParameter(6, 0.25);
  m_expFermiInductFunc->SetParameter(7, 0.15);
  m_expFermiInductFunc->SetParameter(8, 5.5);
  m_expFermiInductFunc->SetParameter(9, 0.015);
 
  m_expFermiPreFunc = std::make_shared<TF1>(funcNamePreFunc.c_str(), ZDCFermiExpFit, tmin, tmax, 9);
 
  m_expFermiPreFunc->SetParameter(0, 1);
  m_expFermiPreFunc->SetParameter(1, 0);
  m_expFermiPreFunc->SetParameter(2, m_tau1);
  m_expFermiPreFunc->SetParameter(3, m_tau2);
  m_expFermiPreFunc->SetParameter(4, 0);
  m_preNorm = 1. / m_expFermiPreFunc->GetMaximum();
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
 
  // The actual paerameters we fit
  //
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "T0_{pre}");
  theTF1->SetParName(4, "C");
  theTF1->SetParName(5, "IndA");
  theTF1->SetParName(6, "IndB");
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, -50, 50);
  theTF1->SetParLimits(3, 0, 1);
  theTF1->SetParLimits(4, 0, 2);
}
 
void ZDCFitExpFermiInductPrePulse::ConstrainFit()
{
}
void ZDCFitExpFermiInductPrePulse::UnconstrainFit()
{
}
 
void ZDCFitExpFermiInductPrePulse::SetPrePulseT0Range(float tmin, float tmax)
{
  if (tmin > GetTMin()) {
    m_preT0Min = tmin;
    GetWrapperTF1()->ReleaseParameter(3);
    GetWrapperTF1()->SetParLimits(3, tmin, tmax);
  }
  else {
    m_preT0Min = -25;
    GetWrapperTF1()->SetParLimits(3, -25, tmax);
  }
  m_preT0Max = tmax;
}
 
void ZDCFitExpFermiInductPrePulse::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2, 5);
  GetWrapperTF1()->SetParameter(3, -10);
  GetWrapperTF1()->SetParameter(4, 0);
  GetWrapperTF1()->SetParameter(5, 0.25);
  GetWrapperTF1()->SetParameter(6, 0.5);
  
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
  // Set parameter errors for fit step size
  //
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, 0.05);
  GetWrapperTF1()->SetParError(3, 1);
  GetWrapperTF1()->SetParError(4, 5.0);
  GetWrapperTF1()->SetParError(5, 0.1);
  GetWrapperTF1()->SetParError(6, 0.1);
}
 
void ZDCFitExpFermiInductPrePulse::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
 
// --------------------------------------------------------------------------------------------------------------------------------------------
//
ZDCFitExpFermiLinearFixedTaus::ZDCFitExpFermiLinearFixedTaus(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCFitWrapper(std::make_shared<TF1>(("ExpFermiFixedTaus" + tag).c_str(), this, tmin, tmax, 4)),
  m_tau1(tau1), m_tau2(tau2)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "s_{b}");
  theTF1->SetParName(3, "c_{b}");
 
  // Now create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiFixedTausRefFunc" + tag;
 
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, -50, 100, 5);
 
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
  m_expFermiFunc->FixParameter(4, 0);
 
  m_norm = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
}
 
void ZDCFitExpFermiLinearFixedTaus::ConstrainFit()
{
  // We force the linear terms to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(2, 0);
  theTF1->FixParameter(3, 0);
}
 
void ZDCFitExpFermiLinearFixedTaus::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1(); 
  theTF1->ReleaseParameter(2);
  theTF1->ReleaseParameter(3);
}
 
void ZDCFitExpFermiLinearFixedTaus::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  float slope     = std::abs(0.1 * initialAmp / initialT0);
  float intercept = std::abs(0.1 * initialAmp);
  GetWrapperTF1()->SetParLimits(2, -slope    , slope    );
  GetWrapperTF1()->SetParLimits(3, -intercept, intercept);
 
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2, 0);
  GetWrapperTF1()->SetParameter(3, 0);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
 
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1);
  GetWrapperTF1()->SetParError(2, 1);
  GetWrapperTF1()->SetParError(3, 0.5);
}
 
void ZDCFitExpFermiLinearFixedTaus::SetT0FitLimits(float t0Min, float t0Max)
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->SetParLimits(1, t0Min, t0Max);
}
 
// --------------------------------------------------------------------------------------------------------------------------------------------
//
ZDCFitExpFermiLinearPrePulse::ZDCFitExpFermiLinearPrePulse(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCPrePulseFitWrapper(std::make_shared<TF1>(("ExpFermiLinearPrePulse" + tag).c_str(), this, tmin, tmax, 6)),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiPerPulseRefFunc" + tag;
 
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, -50, 100, 5);
 
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
  m_expFermiFunc->FixParameter(4, 0);
 
  m_norm = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = ZDCFitWrapper::GetWrapperTF1();
  
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "T0_{pre}");
  theTF1->SetParName(4, "s_{b}");
  theTF1->SetParName(5, "c_{b}");
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2, 1, 4096); // Increase the upper range to 4 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(3, -20, 10);
}
 
void ZDCFitExpFermiLinearPrePulse::ConstrainFit()
{
  // We force the linear terms and prepulse terms to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(4, 0);
  theTF1->FixParameter(5, 0);
}
void ZDCFitExpFermiLinearPrePulse::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->ReleaseParameter(4);
  theTF1->ReleaseParameter(5);
}
 
void ZDCFitExpFermiLinearPrePulse::SetPrePulseT0Range(float tmin, float tmax)
{
  GetWrapperTF1()->SetParLimits(3, tmin, tmax);
}
 
void ZDCFitExpFermiLinearPrePulse::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  float slope     = std::abs(initialAmp / initialT0);  // to be studied more ??? limit 0.1 0.05
  float intercept = std::abs(0.5 * initialAmp);
  GetWrapperTF1()->SetParLimits(4, -slope    , slope    );
  GetWrapperTF1()->SetParLimits(5, -intercept, intercept);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2, 5);
  GetWrapperTF1()->SetParameter(5, 0);
 
  double ampStep = std::min(0.05*initialAmp, std::abs(ampMax - initialAmp)/2.);
 
  GetWrapperTF1()->SetParError(0, ampStep);
  GetWrapperTF1()->SetParError(1, 1.0);
  GetWrapperTF1()->SetParError(2, 1);
  GetWrapperTF1()->SetParError(3, 1);
  GetWrapperTF1()->SetParError(4, 0.1);
  GetWrapperTF1()->SetParError(5, 1);
}
 
void ZDCFitExpFermiLinearPrePulse::SetT0FitLimits(float t0Min, float t0Max)
{
  GetWrapperTF1()->SetParLimits(1, t0Min, t0Max);
}
 
 
// --------------------------------------------------------------------------------------------------------------------------------------------
//
ZDCFitComplexPrePulse::ZDCFitComplexPrePulse(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCPrePulseFitWrapper(std::make_shared<TF1>(("ExpFermiPrePulse" + tag).c_str(), this, tmin, tmax, 7)),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiPerPulseRefFunc" + tag;
 
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, -50, 100, 4);
  
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
 
  m_norm     = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2,    0, 2048);  // Pre-pulse upper bound should not be greater 2 times of ADC range with overflow constrains.
  theTF1->SetParLimits(3,    0,   40);
  theTF1->SetParLimits(6,    0, 4096);  // Increase the upper range to 4 times of ADC range to deal with large exponential tail case of pre-pulse.
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "T0_{pre}");
  theTF1->SetParName(4, "s_{b}");
  theTF1->SetParName(5, "c_{b}");
  theTF1->SetParName(6, "Amp_{exp}");
}
 
void ZDCFitComplexPrePulse::ConstrainFit()
{
  // We force the linear terms and prepulse terms to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(2, 0);
  theTF1->FixParameter(4, 0);
  theTF1->FixParameter(5, 0);
}
void ZDCFitComplexPrePulse::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(2);
  theTF1->ReleaseParameter(4);
  theTF1->ReleaseParameter(5);
}
 
void ZDCFitComplexPrePulse::SetPrePulseT0Range(float tmin, float tmax)
{
  if (tmin > GetTMin()) {
    GetWrapperTF1()->ReleaseParameter(3);
    GetWrapperTF1()->SetParLimits(3, tmin, tmax);
  }
  else {
    GetWrapperTF1()->SetParLimits(3, 0, tmax);
  }
}
 
void ZDCFitComplexPrePulse::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  float slope     = std::abs(initialAmp / initialT0);  // to be studied more ??? limit 0.1 0.05
  float intercept = std::abs(0.1 * initialAmp);       // reduce from 0.25 to 0.1 fix some fail issue
  GetWrapperTF1()->SetParLimits(4, -slope    , slope    );  // if the lower limit is set to 0, there will be some fit fail issue...
  GetWrapperTF1()->SetParLimits(5, -intercept, intercept);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(2,  5);
  GetWrapperTF1()->SetParameter(3, 10);
  GetWrapperTF1()->SetParameter(4,  0);
  GetWrapperTF1()->SetParameter(5,  0);
  GetWrapperTF1()->SetParameter(6,  1);
}
 
void ZDCFitComplexPrePulse::SetT0FitLimits(float t0Min, float t0Max)
{
  GetWrapperTF1()->SetParLimits(1, t0Min, t0Max);
}
 
 
 
// --------------------------------------------------------------------------------------------------------------------------------------------
//
ZDCFitGeneralPulse::ZDCFitGeneralPulse(const std::string& tag, float tmin, float tmax, float tau1, float tau2) :
  ZDCPrePulseFitWrapper(std::make_shared<TF1>(("ExpFermiPrePulse" + tag).c_str(), this, tmin, tmax, 9)),
  m_tau1(tau1), m_tau2(tau2)
{
  // Create the reference function that we use to evaluate ExpFermiFit more efficiently
  //
  std::string funcNameRefFunc = "ExpFermiPerPulseRefFunc" + tag;
 
  m_expFermiFunc = std::make_shared<TF1>(funcNameRefFunc.c_str(), ZDCFermiExpFit, -50, 100, 4);
 
  m_expFermiFunc->SetParameter(0, 1);
  m_expFermiFunc->SetParameter(1, 0);
  m_expFermiFunc->SetParameter(2, m_tau1);
  m_expFermiFunc->SetParameter(3, m_tau2);
 
  m_norm     = 1. / m_expFermiFunc->GetMaximum();
  m_timeCorr = m_tau1 * std::log(m_tau2 / m_tau1 - 1.0);
 
  // Now set up the actual TF1
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  // BAC, parameter 0 limits now is set in DoInitialize
  theTF1->SetParLimits(1, tmin, tmax);
  theTF1->SetParLimits(2,    0, 2048);  // Pre-pulse upper bound should not be greater 2 times of ADC range with overflow constrains.
  theTF1->SetParLimits(3,    0,   40);
  theTF1->SetParLimits(6,    0, 4096);  // Increase the upper range to 4 times of ADC range to deal with large exponential tail case of pre-pulse.
  theTF1->SetParLimits(7,    0, 2048);  // Post-pulse upper bound should not be greater 2 times of ADC range with overflow constrains.
  theTF1->SetParLimits(8,  100,  163);
 
  theTF1->SetParName(0, "Amp");
  theTF1->SetParName(1, "T0");
  theTF1->SetParName(2, "Amp_{pre}");
  theTF1->SetParName(3, "T0_{pre}");
  theTF1->SetParName(4, "s_{b}");
  theTF1->SetParName(5, "c_{b}");
  theTF1->SetParName(6, "Amp_{exp}");
  theTF1->SetParName(7, "Amp_{post}");
  theTF1->SetParName(8, "T0_{post}");
}
 
void ZDCFitGeneralPulse::ConstrainFit()
{
  // We force the linear terms and prepulse terms to zero
  //
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
 
  theTF1->FixParameter(2, 0);
  theTF1->FixParameter(4, 0);
  theTF1->FixParameter(5, 0);
}
void ZDCFitGeneralPulse::UnconstrainFit()
{
  std::shared_ptr<TF1> theTF1 = GetWrapperTF1();
  theTF1->ReleaseParameter(2);
  theTF1->ReleaseParameter(4);
  theTF1->ReleaseParameter(5);
}
 
void ZDCFitGeneralPulse::SetPrePulseT0Range(float tmin, float tmax)
{
  if (tmin > GetTMin()) {
    if (tmin < 0) tmin = 0;
    GetWrapperTF1()->SetParLimits(3, tmin, tmax);
  }
  else {
    GetWrapperTF1()->SetParLimits(3, 0, tmax);
  }
}
 
void ZDCFitGeneralPulse::SetPostPulseT0Range(float tmin, float tmax, float initialPostT0)
{
  GetWrapperTF1()->SetParLimits(8, tmin, tmax);
  float iniPostT0 = initialPostT0;
  GetWrapperTF1()->SetParameter(8, iniPostT0);
}
 
void ZDCFitGeneralPulse::DoInitialize(float initialAmp, float initialT0, float ampMin, float ampMax)
{
  float slope     = std::abs(initialAmp / initialT0);  // to be studied more ??? limit 0.1 0.05
  float intercept = std::abs(0.1 * initialAmp);       // reduce from 0.25 to 0.1 fix some fail issue
  GetWrapperTF1()->SetParLimits(4, -slope    , slope    );  // if the lower limit is set to 0, there will be some fit fail issue...
  GetWrapperTF1()->SetParLimits(5, -intercept, intercept);
 
  GetWrapperTF1()->SetParLimits(0, ampMin, ampMax);
 
  GetWrapperTF1()->SetParameter(0, initialAmp);
  GetWrapperTF1()->SetParameter(1, initialT0);
  GetWrapperTF1()->SetParameter(4,   0);
  GetWrapperTF1()->SetParameter(5,   0);
  GetWrapperTF1()->SetParameter(7,   5);
}
 
void ZDCFitGeneralPulse::SetT0FitLimits(float t0Min, float t0Max)
{
  GetWrapperTF1()->SetParLimits(1, t0Min, t0Max);
}