python.LSFJobRunner.LSFJobRunner Class Reference

Inheritance diagram for python.LSFJobRunner.LSFJobRunner:

Collaboration diagram for python.LSFJobRunner.LSFJobRunner:

Public Member Functions
	__init__ (self, **params)
	submitJob (self, jobConfig)

Detailed Description

LSFJobRunner - run jobs using the LSF batch system

Definition at line 19 of file LSFJobRunner.py.

Constructor & Destructor Documentation

__init__()

python.LSFJobRunner.LSFJobRunner.__init__	(		self,
		**	params )

Constructor (takes any number of parameters as an argument).

Definition at line 22 of file LSFJobRunner.py.

    def __init__(self,**params):
        """Constructor (takes any number of parameters as an argument)."""
        JobRunner.__init__(self)
 
        # Set user-specified parameters only after LSFJobRunner defaults
        self.setParam('batchqueue','8nm','Batch queue')
        for k in params.keys():
            self.setParam(k,params[k])
        self.checkParams()
 

Member Function Documentation

submitJob()

python.LSFJobRunner.LSFJobRunner.submitJob	(		self,
			jobConfig )

Submit a JobRunner job as a LSF batch job.

Definition at line 32 of file LSFJobRunner.py.

    def submitJob(self,jobConfig):
        """Submit a JobRunner job as a LSF batch job."""
        batchCmd = 'bsub -L /bin/bash -q %(batchqueue)s -J %(jobname)s -o %(logfile)s %(scriptfile)s' % jobConfig
        print (batchCmd)
        os.system(batchCmd)
        return None

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The documentation for this class was generated from the following file:

• LSFJobRunner.py