SeedMakingDataStructures.h File Reference

#include "CommonStructures.h"

Include dependency graph for SeedMakingDataStructures.h:

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Classes
struct	doubletInfo
struct	doubletStorage

Typedefs
typedef struct doubletInfo	DOUBLET_INFO
typedef struct doubletStorage	DOUBLET_STORAGE

Variables
static constexpr unsigned int	MAX_MIDDLE_SP = 300000
static constexpr unsigned int	MAX_DOUBLET = 50000000
static constexpr unsigned int	NUM_MIDDLE_THREADS = 32
static constexpr unsigned int	OUTER_THREADS_MULTIPLIER = 4
static constexpr unsigned int	MAX_NUMBER_DOUBLETS = 1500
static constexpr unsigned int	NUM_TRIPLET_BLOCKS = 1024
static constexpr unsigned int	NUM_TRIPLET_THREADS = 1024
static constexpr unsigned int	NUM_DOUBLET_THREADS = 16
static constexpr unsigned int	MAX_TRIPLETS = 300
static constexpr unsigned int	TRIPLET_BUFFER_DEPTH = 3

Typedef Documentation

DOUBLET_INFO

typedef struct doubletInfo DOUBLET_INFO

DOUBLET_STORAGE

typedef struct doubletStorage DOUBLET_STORAGE

Variable Documentation

MAX_DOUBLET

unsigned int MAX_DOUBLET = 50000000

staticconstexpr

Definition at line 9 of file SeedMakingDataStructures.h.

MAX_MIDDLE_SP

unsigned int MAX_MIDDLE_SP = 300000

staticconstexpr

Definition at line 8 of file SeedMakingDataStructures.h.

MAX_NUMBER_DOUBLETS

unsigned int MAX_NUMBER_DOUBLETS = 1500

staticconstexpr

Definition at line 12 of file SeedMakingDataStructures.h.

MAX_TRIPLETS

unsigned int MAX_TRIPLETS = 300

staticconstexpr

Definition at line 16 of file SeedMakingDataStructures.h.

NUM_DOUBLET_THREADS

unsigned int NUM_DOUBLET_THREADS = 16

staticconstexpr

Definition at line 15 of file SeedMakingDataStructures.h.

NUM_MIDDLE_THREADS

unsigned int NUM_MIDDLE_THREADS = 32

staticconstexpr

Definition at line 10 of file SeedMakingDataStructures.h.

NUM_TRIPLET_BLOCKS

unsigned int NUM_TRIPLET_BLOCKS = 1024

staticconstexpr

Definition at line 13 of file SeedMakingDataStructures.h.

NUM_TRIPLET_THREADS

unsigned int NUM_TRIPLET_THREADS = 1024

staticconstexpr

Definition at line 14 of file SeedMakingDataStructures.h.

OUTER_THREADS_MULTIPLIER

unsigned int OUTER_THREADS_MULTIPLIER = 4

staticconstexpr

Definition at line 11 of file SeedMakingDataStructures.h.

TRIPLET_BUFFER_DEPTH

unsigned int TRIPLET_BUFFER_DEPTH = 3

staticconstexpr

Definition at line 17 of file SeedMakingDataStructures.h.