Moriond2016/MakeFileForMJB.py

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# Copyright (C) 2002-2017 CERN for the benefit of the ATLAS collaboration
 
from ROOT import *
from array import array
import sys
import os
import glob
import re
import math
 
from ParseEtaIntercalInput  import ReadEtaIntercalibrationHistograms
from ParseInsituInput       import ReadInSituHistograms
from ParsePileupInput       import ReadPileupHistograms
from ParseFlavourInput      import ReadFlavourHistograms
from ParsePunchthroughInput import ReadPunchthroughHistograms
from Parse2012Input         import Read2012Histograms
 
#http://stackoverflow.com/questions/2669059/how-to-sort-alpha-numeric-set-in-python
from itertools import groupby
def natural_sort(s):
    return [int(''.join(g)) if k else ''.join(g) for k, g in groupby(s[0], str.isdigit)]
 
# NOTES
# Option 1
#  - Freeze cross-calibration histograms by hand outside of eta=0.8 to twice the value of the last sensible bin
#  - Freeze flavour histograms by hand wherever input histogram falls below 0: extrapolate forward in pT from around 2 TeV centrally and from lower pT as eta increases.
#  - Set eta-intercalibration by hand to:
#    - The run-1 uncertainty for |eta| < 0.8
#    - Twice the run-1 uncertainty /in these same bins/ for 0.8 < |eta| < 2.5
#    - Three times the run-1 uncertainty /in these same bins/ for 2.5 < |eta|
#  - FlavorResponse histogram inverted from input file to match Run I convention
#  - Pileup values not changed!!
# Use flag OPT1
 
# Option 2
# 
 
 
 
 
ext = ""
scaleCrossCalVal=1.0
scaleEtaInter3Regions = True
scaleEtaInter2Regions = False
freezeCrossCalAll = True
freezeCrossCalBarrel = False
freezeCrossCalCentral = False
freezeFlavourInPt = True
 
# Check useage and store arguments
if len(sys.argv) < 3:
    print "USAGE: Expected the following arguments"
    print "     1. Directory path to V+jet calibrations"
    print "     2. Eta intercalibration directory path"
    print "     3. Pileup directory path"
    print "     5. Flavour directory path"
    print " 6. Old 2012 file from which to get punchthrough"
    exit(1)
 
outBaselineFile = "JESUncertainty_forMJB.root"
theVPlusJetsDir      = sys.argv[1]
etaIntercalDir  = sys.argv[2]
pileupDir       = sys.argv[3]
flavourDir      = sys.argv[4]
the2012Dir  = sys.argv[5]
 
# Ensure that all of the directories exist
if not outBaselineFile.endswith(".root"):
    print "Output baseline ROOT file doesn't appear to be a root file:",outBaselineFile
    exit(2)
if not os.path.exists(theVPlusJetsDir):
    print "V+jets directory does not exist:",theVPlusJetsDir
    exit(3)
if not os.path.exists(etaIntercalDir):
    print "Eta intercalibration directory does not exist:",etaIntercalDir
    exit(4)
if not os.path.exists(pileupDir):
    print "Pileup directory does not exist:",pileupDir
    exit(5)
if not os.path.exists(flavourDir):
    print "Flavour directory does not exist:",flavourDir
    exit(6)
if not os.path.exists(the2012Dir) :
    print "No 2012 file:",the2012Dir
    exit(7)
 
# Store everything in memory!
currentDir = gDirectory
gROOT.cd()
 
# Now read the histograms
print "Reading inputs..."
# For now, everything except flavour and cross calibration inputs
# are read in from the final 2012 calibration files.
theVPlusJetsHistos = ReadInSituHistograms(theVPlusJetsDir)
etaIntercalHistos   = ReadEtaIntercalibrationHistograms(etaIntercalDir)
pileupHistos        = ReadPileupHistograms(pileupDir)
flavourHistos       = ReadFlavourHistograms(flavourDir,freezeFlavourInPt) # True flag freezes uncertainty above pT = 2TeV (lower at higher eta)
the2012Histos = Read2012Histograms(the2012Dir,scaleEtaInter3Regions,scaleEtaInter2Regions)
 
punchthroughHistos = {}
for key in the2012Histos :
  innerDict = the2012Histos[key]
  newDict = {}
  for name in innerDict.keys() :
    if "PunchThrough" in name :
      newDict[name] = innerDict[name]
  punchthroughHistos[key] = newDict
 
# Make one mega-dictionary
print "Merging inputs..."
jetDefs = {"AntiKt4Topo_EMJES" : "AntiKt4EMTopo", "AntiKt4Topo_LCJES" : "AntiKt4LCTopo"}#"AntiKt6Topo_EMJES","AntiKt6Topo_LCJES"]
systematics = {}
for aJetDef in jetDefs.keys():
 
    systematics[aJetDef] = {}
    dictsToUse = [punchthroughHistos,
                  etaIntercalHistos,
                  theVPlusJetsHistos,
                  pileupHistos,
                  flavourHistos]
 
    for dictionary in dictsToUse :
 
      # We don't have LC inputs for some of these
      if "LC" in aJetDef :
        if aJetDef not in dictionary.keys() :
          useInstead = dictionary["AntiKt4Topo_EMJES"]
          # Need to change name & copy hists so I don't have
          # memory problems down the road
          myNewDict = {}
          for item in useInstead.keys() :
            thisHist = useInstead[item].Clone()
            thisHistName = useInstead[item].GetName().replace("EM","LC")
            thisHist.SetName(thisHistName)
            myNewDict[item] = thisHist
 
          dictionary[aJetDef] = myNewDict
 
      systematics[aJetDef].update(dictionary[aJetDef].items())
 
# Loop over the mega-dictionary and write results
print "Writing to output file",outBaselineFile,"..."
baselineFile = TFile(outBaselineFile,"RECREATE")
for aJetDef,aSyst in sorted(systematics.iteritems(),key=natural_sort):
    for aSystName,aSystHisto in sorted(aSyst.iteritems(),key=natural_sort):
        baselineFile.cd()
        aSystHisto.SetTitle(aSystName+"_"+jetDefs[aJetDef])
        aSystHisto.Write(aSystHisto.GetTitle())
 
# Done, close the files, revert directory
baselineFile.Close()
gDirectory = currentDir
print "Done!"