ATLAS Offline Software
MonitoringFile.h
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1 /*
2  Copyright (C) 2002-2024 CERN for the benefit of the ATLAS collaboration
3  */
4 
5 #ifndef dqutilsMonitoringFile_h
6 #define dqutilsMonitoringFile_h
7 
8 
9 
10 #include <TObject.h>
11 #include <TFile.h>
12 #include <TString.h>
13 #include "RooRealVar.h"
14 #include <TH1.h>
15 
16 #ifndef __CINT__
17 #include <regex>
18 #else
19 // good enough for CINT
20 namespace std {
21  class regex;
22 }
23 #endif
24 
25 #include "CxxUtils/checker_macros.h"
26 
27 #include <map>
28 #include <string>
29 #include <vector>
30 #include <set>
31 
32 class TDirectory;
33 class TGraph;
34 class TH1F;
35 class TH2F;
36 class TH1D;
37 class TH2D;
38 class TH1I;
39 class TH3F;
40 class TH2;
41 class TH3;
42 class TProfile2D;
43 class TObjArray;
44 class TKey;
45 class TTree;
46 class RooPlot;
47 class TEfficiency;
48 
49 
50 namespace dqutils {
51  typedef std::map<std::string, std::vector<int> > keycyclemap;
52  void populateKeyMapping(TDirectory*, keycyclemap&);
53 
54  class ATLAS_NOT_THREAD_SAFE MonitoringFile: public TObject {
55  public:
56  struct MetaData {
57  inline MetaData(const std::string& name_, const std::string& interval_, const std::string& chain_,
58  const std::string& merge_)
59  : name(name_), interval(interval_), chain(chain_), merge(merge_) { }
60  std::string name;
61  std::string interval;
62  std::string chain;
63  std::string merge;
64  };
65 
66 
67  class OutputMetadata {
68  public:
69  OutputMetadata(TTree* metadata);
70  virtual ~OutputMetadata() = default;
71 
72  virtual void fill(const std::string& name,
73  const std::string& interval,
74  const std::string& chain,
75  const std::string& merge);
76  protected:
77  void makeBranch(const char* branchName, const char* branchstr);
78  TTree* m_metadata {};
79  };
80 
81 
82  MonitoringFile();
83 
84  MonitoringFile(const std::string& fileName);
85 
86  virtual ~MonitoringFile();
87 
88  typedef std::map< std::string, TDirectory* > DirMap_t;
89 
90  static void getAllDirs(DirMap_t& dirmap, TDirectory* dir, const std::string& dirName);
91 
92  static TDirectory* createDir(DirMap_t& dirmap, TDirectory* dir, const std::string& parent, const std::string& path);
93 
94  static TKey* getObjKey(TDirectory* dir, const std::string& path);
95 
96  // enum MergeMethod_t { TH1Add = 0, effAsPerCent, weightedAverage, weightedEff, mergeRebinned, weightedAverage2D,
97  // eventSample };
98 
99  void mergeDirectory(TDirectory* outputDir, const std::vector<TFile*>& inputFiles, bool has_multiple_runs = false,
100  std::map< TFile*, std::string >* prefixes = 0);
101 
102  static void fillMetaDataMap(std::map<std::string, dqutils::MonitoringFile::MetaData>& mdMap, TDirectory* dir);
103 
104  void mergeFiles(const std::string& outFileName, const std::vector<std::string>& files);
105 
106  void mergeFiles(const std::string& outFileName, const std::string& listFileName);
107 
108  static void merge_effAsPerCent(TH2& a, const TH2& b);
109 
110  static void merge_perBinEffPerCent(TH1& a, const TH1& b);
111 
112  static void merge_effAsPerCentAlt(TH1& a, const TH1& b);
113 
114  static void merge_weightedAverage(TH1& a, const TH1& b);
115 
116  static void merge_weightedAverage2D(TH2& a, const TH2& b);
117 
118  static void merge_weightedEff(TH1& a, const TH1& b);
119 
120  static void merge_Rebinned(TH1& a, TH1& b);
121 
122  static void merge_eventSample(TH2& a, const TH2& b);
123 
124  static void merge_RMS(TH1& a, const TH1& b);
125 
126  static void merge_RMSpercentDeviation(TH1& a, const TH1& b);
127 
128  static void merge_lowerLB(TH1& a, const TH1& b);
129 
130  static void merge_identical(TH1& a, const TH1& b);
135  //static void MakeBowingFit(TProfile2D* p2d, TH1F* hm, TH1F* hb);
136  static void fitMergedFile_IDPerfMonManager(const std::string& inFileName, bool isIncremental = false);
137  static void fitMergedFile_DiMuMonManager(const std::string& inFileName, bool isIncremental = false);
138  static void fitMergedFile_IDAlignMonManager(const std::string& inFileName, bool isIncremental = false);
139  static bool CheckHistogram(TFile* f, const char* HistoName);
140  static void fitMergedFile_IDAlignMonResiduals(TFile* f, const std::string& run_dir, const std::string& TriggerName);
141  static void fitMergedFile_IDAlignMonTrackSegments(TFile* file, const std::string& run_dir,
142  const std::string& tracksName);
143  static void fitMergedFile_IDAlignMonGenericTracks(TFile* file, const std::string& run_dir,
144  const std::string& tracksName);
145  static void fitMergedFile_IDAlignMonPVbiases(TFile* file, const std::string& run_dir,
146  const std::string& tracksName);
147  static void fitMergedFile_IDPerfMonKshort(TFile* f, const std::string& run_dir, const std::string& TriggerName);
148  static void fitMergedFile_IDPerfMonJpsi(TFile* f, const std::string& run_dir,
149  const std::string& TriggerName);
150  static void fitMergedFile_IDPerfMonUpsilon(TFile* f, const std::string& run_dir,
151  const std::string& TriggerName);
152  static void fitMergedFile_IDPerfMonZee(TFile* f, const std::string& run_dir, const std::string& TriggerName);
153  static void fitMergedFile_IDPerfMonWenu(TFile* f, const std::string& run_dir, const std::string& TriggerName);
154  static void fitMergedFile_IDPerfMonZMM(TFile* f, const std::string& run_dir, const std::string& TriggerName);
155  static void fitJpsiHistograms(TH1F* hmass, TH1F* hwidth, TH1F* h1[], int n);
156  static void fitUpsilonHistograms(TH1F* hmass, TH1F* hwidth, TH1F* h1[], int n);
157  static void fitZmumuMassPlot(TH1F* hmass);
158  static std::pair<RooRealVar, RooRealVar> fitZmumuMass(TH1F* hmass);
159  static void fitZmumuHistograms(TH1F* hmass, TH1F* hwidth, std::vector<TH1F*> hvec);
160  static void processModule(TFile* f, const std::string& run_dir, TKey* key_module, const std::string& moduleName);
161  static void fitMergedFile_DiMuMonAll(TFile* f, const std::string& run_dir, const std::string& resonName,
162  const std::string& triggerName);
163  static void fitHistos(TH2F* hin, const std::vector<TH1F*>& hout, int mode, const std::string& triggerName,
164  const std::string& resonName, TH1F* m_chi2);
165  static void fillGaussianMeanOrWidth(TH2F* h2d, TH1F* h, float fitMin, float fitMax, int iopt);
166  static void fillMeanOrWidth(TH2F* h2d, TH1F* h, int iopt);
167  static void fillDetPaperMeanRMS(TH2F* h2d, TH1F* h, int iopt);
168 
169  static void meanRMSProjections2D(TH2F* h2d, TH1F* h, int iopt);
170  static void meanRMSProjections3D(TH3F* h3d, TH2F* h, int iopt);
171  static void meanRMSProjections3D_DMRPlot(TH3F* h3d, TH1F* h, int iopt);
172  static void meanRMSProjections3D_XY(TH3F* h3d, TH1F* h, int iXY, int iopt);
173  static TH1F* combineHistos(const char* name, const char* title, TObjArray* plots, int gap);
174  static void setMinWindow(TH1* h1, float min, float max);
175  static float getMedian(TH1* h1);
176  static void ProcessAsymHistograms(TH1F* m_neg, TH1F* m_pos, TH1F* m_asym);
177  static void Make1DProfile(TH1* output, TH2* histo);
178  static void MakeMap(TH2* outputhist, TH3* hist);
179  static int IterativeGaussFit(TH1* hist, double& mu, double& mu_err, double& sigma, double& sigma_err);
180 
181  // For MuonTrackMonitoring
182  static void MuonTrackPostProcess(const std::string& inFileName, bool isIncremental = false);
183  static void MuonTrack_Main(const std::string& inFileName, TString dirname);
184 
185  //For RPC
186  static void RPCPostProcess(const std::string& inFilename, bool isIncremental = false);
187  static bool RPCCheckHistogram(TFile* f, const char* HistoName);
188 
189  //For TGC
190  static void TGCPostProcess(const std::string& inFilename, bool isIncremental = false);
191  static void TGCChannelOccupancy(const std::string& inFilename, std::vector< std::pair< std::string, float > >& p);
192  static void TGCChamberOccupancy(const std::string& inFilename, std::vector< std::pair< std::string,
193  float > >& phigh,
194  std::vector< std::pair< std::string, float > >& plow);
195  static void TGCChamberEfficiency(const std::string& inFilename, std::vector< std::pair< std::string, float > >& p);
196  static void TGCChamberTiming(const std::string& inFilename, std::vector< std::pair< std::string, float > >& pro,
197  std::vector< std::pair< std::string, float > >& ptrg);
198  //static void TGCDQResultsToCool();
199  static void TGCsubsectbin2stationeta(int subsect, int bin, int& station, int& eta);
200  static void TGCsubsect2sectorphi(int subsect, int& sector, int& phi4);
201  static void TGCRawHistogramDivision(const std::string& inFilename);
202  static void TGCLV1HistogramDivision(const std::string& inFilename);
203  static int nTGCWireStripMap(int ws, int etac, int phi48);
204  static int getTGCNumberOfWires(const int istationName, const int layer, const int istationEta,
205  const int istationPhi);
206  static void TGCResetContents(TH1* h);
207 
208  //For MDTvsTGC
209  static void MDTvsTGCPostProcess(const std::string& inFilename, bool isIncremental = false);
210  static void MDTvsTGCEfficiency(const std::string& inFilename);
211  static void MDTvsTGCResetContents(TH1* h);
212 
213  class ATLAS_NOT_THREAD_SAFE PostProcessorFileWrapper: public TFile { //class to keep keep track of histograms we
214  // collect
215  public:
216  PostProcessorFileWrapper(const std::string& inFilename, const std::string& name);
217  ~PostProcessorFileWrapper(); //delete all objects accessed from the TFile whose SetDirectory(0)
218 
219  //function to automatically getObject, obj->SetDirectory(target), if target==0 save target for future deletion
220  //option to supply baseDir to get object from subdir of TFile rather than from TFile itself
221  //target if nothing is supplied thatn the object will be set to 0 (protects against f->Write() writing unintended
222  // copies of your histogram
223  template <class T>
224  void get(const char* namecycle, T*& ptr, TDirectory* baseDir = 0, TDirectory* target = 0); //use
225  // TDirectory->GetObject(const
226  // char* namecycle,
227  // void* &ptr);
228  void setDirectory(TH1* h, TDirectory* dir = 0);
229  void setDirectory(TH2* h, TDirectory* dir = 0);
230  void setDirectory(TGraph* g, TDirectory* dir = 0);
231  void setMetaData(TDirectory* targetDir, TH1* h1, TH1* h2 = 0, TH1* h3 = 0);
232  void error();//call this function if you want the underlying TFile not to write i.e. recover error in program
233  private:
234  std::set<TObject*> m_garbage;
235  std::string m_name;
236  bool m_error {};
237  };
238  //
239  //static bool TGCCheckFile(std::string inFilename, std::string& run_dir);
240  static bool TGCCheckHistogram(TFile* f, TString& hname);
241  static void TGCSetMetaData(TDirectory* targetDir, TH1* h1, TH1* h2 = 0, TH1* h3 = 0);
242 
243  //For HLT Muon
244  static void HLTMuonPostProcess(const std::string& inFilename, bool isIncremental = false);
245  static void HLTMuonHistogramDivision(const std::string& inFilename, TString& run_dir);
246  static void HLTMuonTriggerOverlapMatrix(const std::string& inFilename, TString& run_dir);
247  static bool HLTMuonCheckHistogram(TFile* f, TString& hname);
248  static void HLTMuonHDiv(PostProcessorFileWrapper& mf, TString sdir, TString snum, TString sden, TString seff,
249  TString seffg);
250 
251  //HLT Egamma
252  static void HLTEgammaPostProcess(const std::string& inFilename, bool isIncremental = false);
253 
254  static void HLTEgammaEfficiencyOff(TFile* f, TDirectory* trig_dir, TDirectory* off_dir, const TString& pathNum,
255  const TString& pathEff, const std::vector<TString>& varName);
256  static void HLTEgammaEfficiencyRel(TFile* f, TDirectory* trig_dir, const TString& pathPre, const TString& pathRej,
257  const std::vector<TString>& objStage, const std::vector<TString>& varName);
258 
259  //HLT tau
260  static void HLTTauPostProcess(const std::string& inFilename, bool isIncremental = false);
261 
262  static void HLTTauPostProcess(TFile* f, TDirectory* dir,
263  TString pathApp, TString pathAppEff,
264  const std::vector<TString>& lvlN, const std::vector<TString>& varN,
265  const std::vector< std::pair< int, int > >& ratioIndex, int nameStyle,
266  TString nameApp = "");
267 
268  static std::string getPath(TDirectory* dir);
269 
270  // HLT MET
271  static void HLTMETPostProcess(const std::string& inFileName, bool isIncremental = false);
272  static void HLTMETAveragePhivsEtaMaps(TFile* f, TString& run_dir);
273  static size_t HLTMETGetDQLBNRange(TDirectory*& run_dir, std::vector<TString>& lbnDirs);
274  static int HLTMETGetStatusPerBin(TH1I*& hist, int ymin, int ymax, int rmin, int rmax);
275  static void HLTMETDQFlagSummary(TFile* f, TString& run_dir);
276 
277  // HLT Jet
278  static void HLTCaloPostProcess(const std::string& inFileName, bool isIncremental = false);
279  static void HLTCaloAveragePtPhiEtaMaps(TFile* f, TString& run_dir);
280 
281  // HLT Jet
282  static void HLTJetPostProcess(const std::string& inFileName, bool isIncremental = false);
283  static void HLTJetCalcEfficiencyAndRate(TFile* f, TString& run_dir);
284 
285  //JetTagging
286  static void BJetTaggingPostProcess(const std::string& inFileName, bool isIncremental = false);
287  static void BJetTaggingAdjustRanges(TFile* f);
288  static void BJetTaggingNormalise(TFile* f);
289 
290  //HLT MinBiasMon
291  static void HLTMinBiasMonPostProcess(const std::string& inFileName, bool isIncremental = false);
292  static void HLTMinBiasMonGetTargetHistos(TDirectory* source,
293  std::vector< std::pair<TString, TString> >& targetNames);
294 
295  // primary vertex monitoring
296  static void pv_PrimaryVertexMonitoring_calcResoAndEfficiency(const std::string& inFilename,
297  bool isIncremental = false);
298 
299  // primary vertex multiplicity monitoring
300  static void VxMon_move(const std::string& inFilename, bool isIncremental = false);
301 
302  // L1Calo
303  static void L1CaloPostProcess(const std::string& inFileName, bool isIncremental = false);
304  static void L1CaloStabilityRMS(TFile* f, const TString& nameDir, const TString& nameTag);
305  static void L1CaloFillWithError(TFile* f, const TString& nameDir, const TString& nameData,
306  const TString& nameError);
307  static void L1CaloResetEfficiencies(TFile* f, const TString& effDir,
308  const TString& nameDen, const TString& nameEff,
309  int items, double threshold, int binSkip);
310 
311  // Pixel
312  static void PixelPostProcess(const std::string& inFilename, bool isIncremental = false);
313 
314  // Other helper methods
315  // Compute Bin Errors a la Ullrich, Paterno, Xu (see source file for more details)
316  static int ComputeUPXBinErrors(TH1F* hnum, TH1F* hden, std::vector<float>& errors);
317 
323  virtual bool setFile(const std::string& fileName);
324 
325 
326  virtual void printDirectories();
327 
328  virtual void printStatistics();
329 
330 
335  virtual bool copyHistograms(const std::string& outFileName,
336  const std::string& dirName = "all");
337 
338  static std::string getHanResults(const std::string& hanResultsDir, const std::string& input,
339  const std::string& hcfg, const std::string& hcfg_min10,
340  const std::string& hcfg_min30);
341 
342  virtual void printHanConfig();
343 
344  virtual std::string FindCommon(const std::string& name1, const std::string& name2) const;
345  protected:
346  static std::string getIndentation(const std::string& pathName, const std::string& leadingSpace = "");
347 
348  class HistogramOperation {
349  public:
350  virtual ~HistogramOperation() { }
351  virtual bool execute(TH1* hist) = 0;
352  virtual bool execute(TGraph* graph) = 0;
353  virtual bool execute(TEfficiency* efficiency) = 0;
354  virtual bool executeMD(TH1* hist, const MetaData&) {return execute(hist);}
355  virtual bool executeMD(TGraph* graph, const MetaData&) {return execute(graph);}
356  virtual bool executeMD(TEfficiency* efficiency, const MetaData&) {return execute(efficiency);}
357  };
358 
359  class CopyHistogram: public HistogramOperation {
360  public:
361  CopyHistogram(TDirectory* target, const std::string& dirName);
362  CopyHistogram(const CopyHistogram&) = delete;
363  CopyHistogram& operator = (const CopyHistogram&) = delete;
364  virtual ~CopyHistogram();
365  virtual bool execute(TH1* hist);
366  virtual bool execute(TGraph* graph);
367  virtual bool execute(TEfficiency* eff);
368  virtual bool executeMD(TH1* hist, const MetaData& md);
369  virtual bool executeMD(TGraph* graph, const MetaData& md);
370  virtual bool executeMD(TEfficiency* eff, const MetaData& md);
371  protected:
372  void fillMD(const MetaData& md);
373  TDirectory* m_target {};
374  std::string m_dirName;
375  TTree* m_metadata {};
376  };
377 
378  class GatherStatistics: public HistogramOperation {
379  public:
380  GatherStatistics(const std::string& dirName);
381  virtual bool execute(TH1* hist);
382  virtual bool execute(TGraph* graph);
383  virtual bool execute(TEfficiency* eff);
384 
385  std::string m_dirName;
386  int m_nHist1D {};
387  int m_nHist1DBins {};
388  int m_nGraph {};
389  int m_nGraphPoints {};
390  int m_nHist2D {};
391  int m_nHist2DBins {};
392  int m_nEfficiency {};
393  int m_nEfficiencyBins {};
394  };
395 
396  class GatherNames: public HistogramOperation {
397  public:
398  GatherNames();
399  virtual bool execute(TH1* hist);
400  virtual bool execute(TGraph* graph);
401  virtual bool execute(TEfficiency* eff);
402 
403  std::vector<std::string> m_names;
404  };
405 
406 
407  virtual void clearData();
408 
409 
410  static bool dirHasHistogramsInMetadata(TDirectory* dir);
411 
412  static void loopOnHistograms(HistogramOperation& fcn, TDirectory* dir);
413 
414  static bool loopOnHistogramsInMetadata(HistogramOperation& fcn, TDirectory* dir);
415 
416  static bool setListFromFile(std::vector<std::string>& filelist,
417  const std::string& listFileName);
418 
419  TFile* m_file {};
420 
421  /* Methods for merging luminosity block intervals
422  */
423  private:
424  enum debugLevel_t {
425  none = 0, DEBUG, VERBOSE
426  };
427  typedef std::map<TDirectory*, std::vector<TDirectory*> > map_dir_vdir;
428 
429  static void mergeObjsMultiCycles(const std::string&,
430  const std::vector<int>&,
431  TDirectory*, const std::string&,
432  std::unique_ptr<TObject>&);
433  static int mergeObjs(TObject*, TObject*, const std::string&, debugLevel_t debugLevel = none);
434  static int mergeLB_createListOfHistos(TDirectory*, TDirectory*, std::vector<std::string>&, debugLevel_t&);
435  static int mergeLB_recursiveDirCopy(TDirectory*, TDirectory*, TDirectory*, std::vector<std::string>&,
436  debugLevel_t&);
437  static int mergeLB_processLBinterval(std::vector<TDirectory*>&, TDirectory*, debugLevel_t&);
438  static void buildLBToIntervalMap(std::vector<TDirectory*>&, std::vector<TDirectory*>&, map_dir_vdir&,
439  debugLevel_t&);
440  static int mergeLB_processLB(std::vector<TDirectory*>&, std::vector<TDirectory*>&, debugLevel_t&);
441  static int mergeLB_processRun(TDirectory*, debugLevel_t&);
442 
443  static Int_t getNumBins(const TH1& hist);
444  std::regex* m_mergeMatchHistoRE {};
445  std::regex* m_mergeMatchDirRE {};
446  std::string m_mergeMatchHistoREString;
447  std::string m_mergeMatchDirREString;
448  bool m_useRE {};
449  static std::atomic<int> m_debugLevel;
450  static std::atomic<int> m_fileCompressionLevel;
451  public:
452  static int mergeLBintervals(const std::string&, const std::string& debugLevel = "none");
453  static int getDebugLevel();
454  static void setDebugLevel(int level);
455  static int getCompressionLevel() {return m_fileCompressionLevel;}
456  static void setCompressionLevel(int level) {m_fileCompressionLevel = level;}
457  bool setHistogramRegEx(const std::string& re);
458  bool setDirectoryRegEx(const std::string& re);
459 
460  ClassDef(MonitoringFile, 0) // Provides functions to manipulate and analyze data-quality monitoring files
461  };
462 
463  std::string getInputDirectory(const std::string& outputDirName, TFile* input, bool has_multiple_runs,
464  std::map< TFile*, std::string >* prefixes);
465 
466  std::string getOutputDirectory(const std::string& inputDirName, TFile* input, bool has_multiple_runs,
467  std::map< TFile*, std::string >* prefixes);
468 
469  std::string getOutputDirectory(TKey* key, TFile* input, bool has_multiple_runs, std::map< TFile*,
470  std::string >* prefixes);
471 
472  template <class T>
473  void MonitoringFile::PostProcessorFileWrapper::get(const char* namecycle, T*& ptr, TDirectory* baseDir,
474  TDirectory* target) {
475  if (baseDir) baseDir->GetObject(namecycle, ptr); // suggested root function
476  else this->GetObject(namecycle, ptr); //suggested root function
477  if (!ptr) return;
478 
479  if ((T::Class())->InheritsFrom("TH1")) {
480  TH1* obj = reinterpret_cast<TH1*> (ptr);
481 
482  obj->SetDirectory(target);
483  if (target == 0) m_garbage.insert(obj);
484  } else {
485  TObject* obj = reinterpret_cast<TObject*>(ptr);
486 
487  if (target == 0) m_garbage.insert(obj);
488  }
489  }
490 } // namespace dqutils
491 
492 // #include "DataQualityUtils/MonitoringFile_PPFileWrapper.cxx"
493 #endif
dqutils::MonitoringFile::CopyHistogram::execute
virtual bool execute(TGraph *graph)
dqutils::MonitoringFile::getAllDirs
static void getAllDirs(DirMap_t &dirmap, TDirectory *dir, const std::string &dirName)
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virtual bool copyHistograms(const std::string &outFileName, const std::string &dirName="all")
Copy the indicated set of histograms to an output file.
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static TDirectory * createDir(DirMap_t &dirmap, TDirectory *dir, const std::string &parent, const std::string &path)
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Definition: MonitoringFile.h:54
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static void setDebugLevel(int level)
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